KEGG   Brevundimonas sp. LM2: BZG35_03960
Entry
BZG35_03960       CDS       T04750                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
brl  Brevundimonas sp. LM2
Brite
KEGG Orthology (KO) [BR:brl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brl03016]
    BZG35_03960
Enzymes [BR:brl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BZG35_03960
Transfer RNA biogenesis [BR:brl03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BZG35_03960
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AQR60899
UniProt: A0A1S6ES22
Position
800037..800651
AA seq 204 aa
MTVYLHEGDLPDDLDLGPEVAVDSETMGLRFRRDPLCVVQLSSGDGDAHVVRLNRPGYDC
PNLKRLMADRGVLKIFHFGRFDIAMVELHLGVETGPVYCTKIASKLARTYTDRHGLKDVA
REMAGIDLSKAQQSSDWGAPELSQAQLEYAASDVLHLHVIMRRLNEMLVREDRMTLAQAC
FDFLPTRARLDLRGWDEMDIFAHT
NT seq 615 nt   +upstreamnt  +downstreamnt
atgactgtctacctgcatgagggcgacctgcccgacgacctggacctgggcccggaggtc
gcggtcgattccgagaccatggggctgcgcttccgccgcgatcccctgtgcgtggtccag
ctgtcctcgggcgacggcgacgcccacgtcgtgcgcctgaaccgtcccggctacgactgt
ccgaacctgaagcggctgatggccgaccggggggtgctcaagatcttccatttcggccgg
ttcgacatcgctatggtcgaactgcacctgggggtagagaccggcccggtctactgcacc
aagatcgcctcgaaactggcccgcacctacaccgaccggcatgggctgaaggacgtggcg
cgcgagatggcggggatcgacctgtcgaaggcccagcagtcgtcggactggggcgcgcca
gaactgtcgcaggcccagctggaatacgccgcctccgatgtcctgcacctgcacgtcatc
atgcgccggctgaacgagatgctggtgcgcgaggatcggatgaccctggcccaggcctgt
ttcgacttcctgccgacccgcgcgcgcctcgatctgcgcggctgggacgagatggacatc
ttcgcgcacacctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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