KEGG   Brachyspira murdochii: Bmur_2534
Entry
Bmur_2534         CDS       T01229                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
brm  Brachyspira murdochii
Pathway
brm03030  DNA replication
brm03410  Base excision repair
brm03420  Nucleotide excision repair
brm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bmur_2534
   03410 Base excision repair
    Bmur_2534
   03420 Nucleotide excision repair
    Bmur_2534
   03440 Homologous recombination
    Bmur_2534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brm03032]
    Bmur_2534
   03400 DNA repair and recombination proteins [BR:brm03400]
    Bmur_2534
Enzymes [BR:brm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bmur_2534
DNA replication proteins [BR:brm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Bmur_2534
DNA repair and recombination proteins [BR:brm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Bmur_2534
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bmur_2534
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ADG72603
UniProt: D5U6A4
Position
2862492..2865272
AA seq 926 aa
MKKTFLIIDAFGILYRYHFIFLKRPLLNSKGQNVSSINGFMRTYFSLINTYPAEYTAIAL
DSSRKTFRNEIYKEYKENRESMPDDLRSQIPILYNLIDALGISRIVLDNYEADDIVGTIA
EKNKKENIKTIIYSPDKDILQLVCDDVRVVASNKDNELMEYDEETVKEKRGVYPNQIIDL
LALMGDASDNIPGVKGVGEKTALKLLEEYKSLDGIYENIDSIKGKVQEKLIESKDMAYMS
YKLATIEKNIKDFNLDYNEIAKNKINIEEVNKILDELELKQIRDKINSYIYGVSSKKEEK
VKILNNTDDSSKSEENKEDKKEESPILSAKDNKASYYLIENETELKNLLNDINSKKLVCV
DFETTGLDVFKDTIIGISFAIRSNEAFYLDVSGRTNIDKDKCIDMVFETLAKEDIKVIGH
NLKYEYKMMRAINKSFGNMYFDTMVAAYLINPTRGRYNMDDLAIAYLSYNTIKYSDITDN
AKKTLLDVPLKDVVEYACEDADITFRFYECFAPLLKTHNLEELFFNIEMPLVSVLADMEF
DGVYISSEKMKALSDEYSSLLEKTKKKIYAEAGEEFNIQSPKQLEYILFDKMGIPPTKKT
KTGFSTDEEVLTELSQKYKIAEYMLTYRKYAKLKNTYLDVFPTLINEKTGRIHASFNQTV
TATGRLSSSEPNLQNIPVRGEEGREIRNTFIAEKGNLLIAADYSQIELRLLAHFSNDPAL
VEAFKNNDDIHRKTAMKIYSVSKEHVTASMRNIAKIINFSIIYGKTAFGLSKELGIKRKE
AEDFIKGYFSTYSRVKPFCEEVVEEVRNKGYVRTMCGRIRDLSKTINSSNAMARNEAERM
ALNTLIQGSAADMIKVAMVAIHKEFKNHFKTAKIVMQVHDELVVEVSEKEADKAMTIMKE
IMEHSVKTNVPITVDIHKGNSWGEVH
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgaaaaaaacttttcttattatcgatgccttcgggatactttacagataccactttatt
tttttgaaaagacctcttttaaactctaaggggcagaatgtttcatctatcaatggtttt
atgagaacttatttttctcttataaatacctatccagcagaatatactgctatagcttta
gacagctcaagaaaaacattcagaaatgaaatatataaagagtataaagaaaacagagaa
agtatgcctgatgatttgagaagtcagatacctatactttataatttgatagatgctttg
ggaatatcaagaatagtgcttgataattatgaggctgatgatattgtaggaactattgct
gaaaaaaataaaaaagagaatattaaaactattatttactctccggataaagatatactt
cagcttgtatgcgatgatgttagggtggttgctagtaataaagataatgaacttatggag
tatgatgaagagactgttaaggagaagagaggagtttatcctaatcaaataatagattta
cttgctttaatgggagatgcttctgataatataccgggagttaaaggggtaggtgagaaa
actgctttaaaacttcttgaagagtataagagcttggacggaatatatgaaaatattgat
tctataaaaggaaaagtgcaggaaaaattaatagaatcaaaagatatggcatatatgagc
tataaacttgctactatagaaaaaaatataaaagattttaatttggattataatgagata
gcaaaaaataaaataaatattgaagaagttaataaaatattagatgaactagaattaaaa
caaataagagataaaattaattcttatatatacggagtaagcagcaaaaaagaagaaaag
gtaaaaatattgaataatactgatgattcatctaaatccgaagaaaataaagaagataaa
aaagaagaaagcccaatacttagtgctaaagataataaagcaagctattatttaatagaa
aatgaaacagaattaaaaaatttattaaatgatattaatagcaaaaaattagtatgcgtg
gattttgaaactacaggtcttgatgtatttaaagatactataataggaatatcttttgca
ataaggtctaatgaagcattttatttagatgtaagcggaagaacaaatatagataaagat
aaatgcatagatatggtatttgaaactttagccaaagaagatataaaagttataggacat
aatcttaaatatgaatacaaaatgatgagggctattaataaaagttttggaaatatgtat
tttgatactatggtagcagcatatttgattaatcctacaagaggaagatataatatggac
gatttggctattgcgtatctttcatacaatactataaaatacagcgatataacggataat
gctaaaaaaactttattggacgtgcctttaaaagatgttgttgaatatgcatgcgaagat
gcggatataacatttagattttatgaatgctttgctcctcttttaaaaacacataatctt
gaggaattattttttaatatagaaatgcctcttgtaagcgtacttgctgatatggagttt
gacggagtatatataagcagcgaaaagatgaaagcattatctgatgaatattcttctctt
ttagaaaaaacaaagaaaaaaatatatgcagaagcaggggaggagtttaatattcagtct
cctaaacagcttgaatatatactatttgataaaatgggaatacctcctaccaaaaaaact
aaaacaggattttctactgacgaggaagtattaacagaattatcgcagaaatataaaata
gctgaatatatgctcacatacagaaaatacgcaaaattaaaaaatacttatcttgatgta
tttcctactttgataaatgaaaaaaccggaagaatacatgcttcattcaatcagacagta
acagctactggacgtttatcatcatcagagcctaatttgcagaatattccagtgagagga
gaagagggcagagagataagaaatacattcatagctgaaaaaggaaatttacttatagca
gcagactattctcaaatagaattaagactattagcacatttcagtaatgaccctgcatta
gtagaagcatttaaaaataatgatgatattcacagaaaaacagcaatgaaaatatattct
gtaagtaaagagcatgtaactgcatcaatgagaaatattgctaaaataataaacttctct
attatttatggtaaaacagcattcggactttcaaaagagttgggtataaaacgtaaagaa
gcagaggattttataaaaggatatttttctacttattcaagagtaaaacctttctgtgag
gaagttgttgaggaggtaagaaataaaggctatgttcgtactatgtgcggaaggattaga
gatttatctaagactataaactcatcaaatgctatggctagaaatgaggctgagagaatg
gctttaaatactcttattcagggaagtgctgcggatatgataaaggtagctatggttgct
atacataaagagtttaaaaatcattttaaaactgccaaaatagttatgcaagttcatgat
gaattagtagttgaagtttctgaaaaagaggcagataaagccatgactataatgaaagag
ataatggagcattcagtaaaaactaatgttcctataacagttgatatacataagggcaac
agttggggcgaggttcattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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