KEGG   Bradyrhizobium sp. ORS 285: BRAD285_2840
Entry
BRAD285_2840      CDS       T04956                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bro  Bradyrhizobium sp. ORS 285
Pathway
bro03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BRAD285_2840 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bro03021]
    BRAD285_2840 (rpoA)
   03400 DNA repair and recombination proteins [BR:bro03400]
    BRAD285_2840 (rpoA)
Enzymes [BR:bro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BRAD285_2840 (rpoA)
Transcription machinery [BR:bro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BRAD285_2840 (rpoA)
DNA repair and recombination proteins [BR:bro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BRAD285_2840 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211 RNA_pol_L_2 IDH
Other DBs
NCBI-ProteinID: SMX57892
UniProt: A0A1Y6KDU5
Position
2763121..2764152
AA seq 343 aa
MGETVTIQKNWQELIRPNKLQVTPGSDATRFATVVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDIAIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDIVVLNPDLPLCTLDEGAEIRMEFTVATGKGYVAADRNRPEDAPIGLIPVDSL
FSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPEDAVAYAARILQDQLNVFVNFEE
PRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgggtgaaacagtgacgatccagaagaattggcaagaattgattcggccgaacaagctc
caggtcacgccgggctccgacgcgacccgtttcgccaccgtggttgccgagccgctggag
cgcggcttcggccagacgctgggcaacgcactgcgccgcatcctgctgtcgtcgctgcag
ggcgcggccgtgcagtcggtgcacatcgacggcgtgctgcacgagttctcctcgattgcc
ggcgtccgcgaggatgtcaccgacatcgttctgaacatcaaggacatcgcgatcaagatg
cagggcgaaggcccgaagcgcatggtcgtgaagaagcagggtccgggtgccgtcaccgcc
ggtgacatccagaccgtcggcgacatcgtcgtgctcaaccccgacctgccgctctgcacc
ctggacgagggcgccgagatccgcatggagttcacggtcgccaccggtaagggctatgtc
gccgccgatcgcaaccgccccgaggacgcgccgatcggcctgatcccggtcgacagcctg
ttctcgccggtccgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatctcgccggaggacgcg
gtggcctatgccgcgcgcattctgcaggatcagctcaacgtgttcgtcaacttcgaagag
ccgcgcaaggaagtcgcccaggagatcatcccggacctcgccttcaacccggccttcctc
aagaaggtggacgagctcgagctgtcggtgcgttcggccaactgcttgaagaatgacaac
atcgtctacatcggcgacctcgtgcagaagtcggaagcggagatgctgcgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctggccaagcgcttcgag
gatcactactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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