KEGG   Brassica rapa (field mustard): 103830753
Entry
103830753         CDS       T03449                                 
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox-leucine zipper protein HDG11
  KO
K09338  homeobox-leucine zipper protein
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:brp03000]
    103830753
Transcription factors [BR:brp03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain other
    103830753
SSDB
Motif
Pfam: START Homeodomain Homeobox_KN zf_Rg APC_N_CC
Other DBs
NCBI-GeneID: 103830753
NCBI-ProteinID: XP_009104812
UniProt: M4CI13
Position
A07:21348377..21351603
AA seq 705 aa
MSFVVGGSGSGGGDGGGGGGSSQRHDASESDRKKKRYHRHTAQQIQRLESSFRECPHPDD
KQRNLLSKELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREAIKH
AICPNCGGPPVSEDPYLDEQKLRMENAHLRQELERMSTVASKYMGRPISSHISTLHPMHI
SPLDLSMTGPSLDFDLLPGSSMSSNFAVSDMDKPIMNDIALTAMDELLRLVHTNEPLWSR
SDGRGEILNLGSYENVFPRSSNRGKNHNVRIEASRSSGIVFMNAMSLVDMFMDSAKWAEL
FPSIVAASKTLAVVSSGMGGGTHEGALHLMYEEMEVLSPLVATREFCELRYCQQIEQGSW
IVVNVSYHLPQFVSHSHSYRFPSGCLIQDMPNGYSKVTWVEHTETEEKEPVHELYREMVH
KGIAFGAERWVTTLQRMCERFASLLAPAVSSLGGVIPSPEGKRSMMRLAHRMVSNYCISV
SRSNNTRSTVVAELNDVGVRVTAHKSPEPNGTILSAATTFWLPNSPQNVFNFLKDERTRP
QWDVLSNSNAVQEVAHIANGSHPGCCISVLRASSASQSNNMLILQETSIDSSGALVVYSP
VDLSALNIAMNGDDTSYIXLLSSGFAISPDGNRNSPSAEQGGASSSSGYGGGGSLITVGF
QIMVSNLPSAKLNMESVETVNNLIGTTVHQIKTGLNNCPSASTTA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgagtttcgtcgtcgggggaagtggtagcggcggcggagacggtggtggtggtggtggt
agtagccaacgtcacgacgcgtctgaaagtgataggaagaagaaacgttaccatcgtcat
actgctcaacagattcaacgcctcgaatcgagttttagggagtgtcctcatccagatgac
aaacagaggaatctacttagcaaagagttgggtttggctccaagacagatcaagttctgg
ttccagaacagaagaactcagcttaaggcgcaacatgagagagcagacaacagtgcacta
aaagcagagaacgataagattcgatgcgaaaacatagccatcagagaagctatcaagcat
gctatatgcccaaactgtggaggccctcccgttagtgaagatccttacttagatgagcaa
aagctccgcatggaaaacgcacatctcagacaagagcttgaaagaatgtcaacagttgca
tcaaagtacatgggaagaccaatctcatctcacatctcaactctacatccaatgcacatc
tcaccgttggatctctccatgactggtccttcgcttgattttgatcttcttccaggaagc
tccatgtctagcaacttcgctgtatctgacatggacaagcctatcatgaacgacattgct
ttgactgctatggatgaattgctcaggcttgttcacacaaacgagcctctgtggagtaga
tcagatggacgcggagagattctcaatcttggaagctatgagaatgttttcccaaggtca
agtaaccgagggaagaaccataacgtgagaattgaagcgtctaggtcctctggtattgtt
ttcatgaatgctatgtcacttgtcgacatgttcatggatagtgccaagtgggcagagctg
tttccttcaatcgttgcagcttctaaaacacttgcagtggtttcttcaggaatgggaggt
ggtacccatgagggtgcattgcatttgatgtatgaagagatggaagtgctttctccattg
gtagcaacacgcgagttctgcgagctacgctactgtcagcagattgagcaagggagctgg
atagttgtgaacgtctcatatcatcttcctcagtttgtttcacactctcactcctatagg
tttccatctggatgcttgattcaggacatgcctaatggatactccaaggttacttgggtt
gagcatactgaaaccgaagagaaagaaccggtccatgagctctacagagagatggttcac
aaagggattgcttttggagctgaacgttgggttactactctccagagaatgtgtgaaagg
tttgcgtctctattagcaccagcagtttcatccctcggtggagtgattccatcgccggaa
gggaagagaagcatgatgagacttgctcataggatggttagcaactactgtataagtgtc
agcagatctaacaacactcgctcaacggttgttgcggagctgaatgatgttggtgtccgt
gttactgcacataagagccctgaaccaaacggcactatcctctctgctgctaccactttc
tggctcccaaactctcctcaaaacgtcttcaacttcctcaaagacgaaagaactcgtcct
cagtgggatgttctttcaaatagtaacgcggttcaagaagttgctcatatagcaaacgga
tcacatcctggttgctgcatatcagttctacgtgcatcgagtgcatcacagagtaacaac
atgctgattctacaagaaacctcaatagactcatcaggagcacttgttgtgtacagtcct
gtggatttatcagcgctgaacattgcaatgaacggtgacgatacttcatacattncactc
ttgtcctcaggcttcgcaatctcaccagatggaaaccgcaatagtccaagtgctgagcaa
ggaggagcctcatcgtcaagcggttatggaggaggagggtcattgataacggttgggttt
cagataatggttagcaacttaccgtctgctaaacttaacatggagtcggtagaaacggtt
aataacctgattggaaccacagtgcatcagattaaaaccgggttgaacaactgtcctagt
gcttcaactacagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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