KEGG   Brassica rapa (field mustard): 103830855
Entry
103830855         CDS       T03449                                 
Name
(RefSeq) serine hydroxymethyltransferase 2, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00260  Glycine, serine and threonine metabolism
brp00460  Cyanoamino acid metabolism
brp00630  Glyoxylate and dicarboxylate metabolism
brp00670  One carbon pool by folate
brp01100  Metabolic pathways
brp01110  Biosynthesis of secondary metabolites
brp01200  Carbon metabolism
brp01230  Biosynthesis of amino acids
brp01240  Biosynthesis of cofactors
Module
brp_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    103830855
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    103830855
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    103830855
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    103830855
Enzymes [BR:brp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     103830855
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DUF2521
Other DBs
NCBI-GeneID: 103830855
NCBI-ProteinID: XP_009104919
Position
A07:21821437..21825172
AA seq 509 aa
MALALRRLSSSLKKPIFSNGGSFRSMSSTPAAERSRSTWIRQLNAPLEEIDPEIADIIEL
EKARQWKGFELIPSENFTSASVMEAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR
ALEAFHLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKK
ISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKVCD
KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQ
GKEVMYDYEDRINAAVFPGLQGGPHNHTITGLAVALKQVKTPEYKAYQDQVLRNCSKFAE
TLLSKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG
IRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSE
MAKLREMVEEYAKQFPTIGFEKETMRYKE
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgctggctcttcgcagactctcctcttccctcaagaagcccatcttctccaatggc
ggttccttccgttctatgtcgtctacgccagccgcggagagatctcgttccacttggata
agacaactcaatgcacctcttgaagaaatcgatcctgaaatcgcagatatcatcgagctc
gagaaggctaggcaatggaagggatttgagcttataccgtcagagaacttcacctctgcc
tcggttatggaagctgtgggctctgttatgactaacaagtatagtgaaggttaccctggt
gctagatactatggaggcaatgagtacattgacatggcagagtctttatgtcaaaaacgc
gcacttgaagcttttcacttagatccttccaaatggggagtcaatgtgcagtctttatca
ggatcaccagctaacttccaagtttacactgcattgctgaagcctcacgaaagaatcatg
gcacttgacttgcctcatggtggccatctttctcatggttatcagactgacacgaagaaa
atatctgctgtgtccatcttttttgagacaatgccatacagattggatgagaacactggt
tacattgattatgatcagctagaaaagagtgccgtgcttttcagacccaaacttatcgtt
gcaggtgcaagtgcttatgctcgtctatacgactatgcacgtattcgtaaggtctgtgac
aagcaaaaggcggttatgcttgctgacatggctcatattagtgggttggttgctgctggt
gtgataccttctcctttcgagtatgcagatgttgttaccactacaactcacaaatcgctt
cgaggtcccagaggggctatgatattctttaggaaggggttgaaagaggttaacaaacaa
ggaaaagaggtcatgtatgactatgaggacagaattaacgcagctgtttttcctggactg
caaggtggtccgcataatcacacaatcacaggtcttgcagttgctttgaagcaggtgaaa
acacctgagtataaggcctaccaggatcaagttctccgtaattgttcaaagtttgcagag
actttgctatcaaaaggatatgacttagtgtctggaggcactgagaatcatttagttttg
gtgaatttgaaaaacaagggaatagatggatcaagagtggaaaaagtattagaatcagta
catattgcagcaaacaagaacactgttcccggtgatgtttctgctatggttcctggtggc
atccgtatgggaacaccagctctcacatcaagaggattcattgaggaagattttgcaaaa
gtggctgaatacttcgatttagccgtcaagatagccttgaagatcaaggcagaatctcaa
ggaacgaagctgaaggactttgtagcaacaatgcaatcaaatgagaagttacagtcagag
atggcaaagctgcgtgagatggttgaagaatatgctaaacagttcccaaccattgggttc
gagaaagagacgatgagatacaaagagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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