KEGG T03449: 103833479

Brassica rapa (field mustard): 103833479

Entry

103833479         CDS       T03449

Name

(RefSeq) Fanconi anemia group D2 protein homolog

K10891

fanconi anemia group D2 protein

Organism

brp Brassica rapa (field mustard)

Brite

KEGG Orthology (KO) [BR:brp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103833479
DNA repair and recombination proteins [BR:brp03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FANCD2-I complex
     103833479

SSDB

Motif

Pfam:

FancD2 FANCI_S2

Other DBs

NCBI-GeneID:

103833479

NCBI-ProteinID:

XP_033133697

Position

A08:9593788..9607906

AA seq 1487 aa
MVFLSRKKPPPPPPSSSSAPPPSSSSAAPPPKFPRPQKKSADEPDAVEKMTAILAEAGCT
LNNPYGPPCLPSDLHAFRRHLTTRFSSCSASSAERDSVSDLRSVFVAGFSSYIQSPSNLR
RVLSSSSSTKRDDSLVRNLLLVSPIQLDLQETLLEKLPEYFDVVSGCSLEEDVARLIIKH
FRWLDFIVNPDVFTDKLMEVLSISPPHLKKEIIGSLPEIIGDHISRAVVDSLEKMLQEDS
SVVVPVLDSFSNLNLDDQLQEQALTVAISCIRTIDAEHMPYLLRFLLLAATQANVRRIIS
QIRQKLKFTGISQPCASQNKLKGKVPAYNSEGSILHALRSSLRFKNILCQEIIKELNGLE
KPRDFKVIDVWLLILMYMNGDPIRKSIEKIFKKKVVDGCIQEALLDQCICGNKEFVKDNF
GSFISLAEHLLSSKEEKAREFGSHIYTRLFEGFADNYSRQEILGALVTHVGSDNKFEVSS
VLEMMTVLAKKYAQQLLPFSSHINGILDYLEGFNVENLHKVYEVFSLLALSARASPDSFR
SSISNELMMIVRKQISHPDLKYQKMGLVGTLRIVSSLGDATSVPDCSSSQVSDCGEILEL
LKTSVDSCRQSNLALIIFYDEFAAILSQKLLQPEIMEWIGKHLGEFESLFLADLENGEMA
NKSSYSGLEGDLWMNLDGSISPICLNILALASSSSESCCLQILPSNFLLLSSVERLTNGG
SLAGIDALLGCPLHLPSSKYFAAAGWQSLTTKQREILSLSLYYAANWIRELLNAFSSQID
KRDGCISQATEKDVTTKLLMRLRNLILLESLLSNLITLSPQSLPELHPYSATSQHTDHPE
RKTEKRKLQDDDASQRKGNMKNKLKKSKQSSVDEHLRQPTILDAFKKAGVVTSQTQLHEN
PSPSSLDGRIASGSMHETCSGDESLSVKIPQLSPALAAQRFKFRPLLPQCLSILKFPKVQ
SQNIRNPEYKAELPLYLYLLQDLHTKLDSLVPPGKLLPFKRGSPPGYLGGFKLVELVSQI
KGLFPSLRMHLNTAMSLLIKGEETPQTIWRDEFAKAGNPNTSNIVVSESLIYTMVCKEVL
FCFSKMLTLPGFETDKSLLLDLLEAFQPTDIPVDSFADLQPFPSPGTKDYLFIGVYCFFE
DILNNACSFSFDLAFECLLTLQLVVTSAQKYIGKVSEEVTKNRYVGPIQGLVPSLHAKLG
TSAEKLLRHEWIDETTDNKGLKNKGEMVQNILRIYLETSGSTSDLLDELACTILPQASLS
KSTGEEDAHDHEFPTLCSATFRGWYKTLHEENLAILNKLVKVVSSEKRQNCQSEATEAHL
RDIQKTVNVIVSLVNLCRSHDKVTIHGMAIKYGGKYVDSFLKVFDFLEAHIQDHNELVIQ
LVKDLQKATRTLQTLCSEAKGMKQTAITSKIPATKRSLERFLFHVKALLHTTSRGSNFWM
GSLKHKDLRGQIVSSQAYVDNETDEVEEETMSGGEDPMEADELPSSP

NT seq 4464 nt +upstreamnt +downstreamnt
atggtgtttctctctcgcaaaaagcctccaccgcctccgccatcttcctcatctgctccg
cctccgtcgtcttcctcagctgctccgcctcccaaattcccccggccgcaaaagaaatcc
gccgatgaacccgacgcggtggagaagatgactgcgattctagcggaagctggctgcaca
ctgaacaacccgtacggtcctccatgtctcccctccgatctccacgccttccgccgccat
ctcacgactcgcttttcgtcttgctccgccagttccgccgagagagatagcgtcagtgat
ctccgctcagttttcgtagctggattctcatcgtacattcaatctccgagtaatcttcgt
agagtactttcctcttcttcatcaacaaagagagacgactcattagtccgtaacctcctc
cttgtatcccccatccagcttgatctacaagaaacgcttctcgagaagcttcctgagtac
ttcgacgtcgtttcgggatgttcccttgaggaggatgttgctcgcctcatcatcaagcat
ttccgctggctcgacttcattgttaatcccgatgtgttcaccgataagctgatggaagtt
ctatcgatctctcctccgcacttgaagaaggagatcattggatcgttgccggagattatt
ggggatcacatctctcgcgctgtggttgattctctagagaagatgcttcaggaggattcc
tctgttgttgttccagttcttgattctttctctaacctcaatttagatgatcaattgcaa
gaacaggcgcttacagtagcgatatcatgtattagaacaatcgacgcagagcatatgccg
tatctacttaggttcttgcttcttgctgctactcaagcaaatgttagaagaataatctct
cagatacgccaaaagttgaagttcaccggaatctcacaaccttgtgcttctcaaaacaaa
ctcaaaggaaaagtacctgcgtataattcagaaggttctattctccatgctttgagatca
agccttcggtttaagaatatactctgtcaagaaatcataaaggagctgaatggtctggag
aaacctcgagatttcaaggtaatcgatgtatggctgcttattctcatgtatatgaatggg
gatcccatcaggaagagcatcgagaagatatttaagaagaaagtggttgatggatgcata
caagaagccttgcttgatcaatgtatatgtggcaataaagagtttgtgaaggataacttt
ggatcgtttatttctttggctgaacacctcttgtcaagcaaagaagaaaaagcaagggag
tttggctcgcatatctatactcgtctttttgaagggtttgctgacaattattccagacaa
gagatactaggtgccctagtgacacatgtgggatctgataacaaatttgaggtcagttca
gtcctagagatgatgacggttctggcgaaaaaatatgcacagcaactccttcccttttct
tctcacataaatggtattttggactacttggagggatttaatgtggaaaatttgcataag
gtctatgaggttttcagtctcctcgcactatcagctcgtgcaagtcctgattcttttcga
tcttcaatttcgaatgaacttatgatgatagtaaggaagcagattagtcatccagatctc
aagtaccaaaagatggggttagttggaactctaaggattgtttcatcacttggggatgca
accagtgttccggactgttcatcatctcaggtttcagattgtggggagattttggagctc
ttaaagacatctgtagactcttgcagacagtctaacttagccctaattattttctatgat
gagttcgctgccattctcagccagaaactacttcagccagaaattatggagtggatcggg
aagcatctgggagaatttgagtcactatttctggccgatcttgaaaacggagaaatggct
aataagagttcatattctggactagaaggggatctttggatgaacttggatggtagtata
tcaccaatctgtttgaacattttggccctggcatcttcatcctcagagtcttgttgtctg
cagattcttccttcaaattttcttttgctatcatctgttgagagattgacaaatggtgga
tcccttgctggaattgatgctctgctcggatgccctttgcaccttccttcttccaagtac
tttgccgcagctggatggcaatctctgacaacaaagcagagagaaatcctctctctctct
ttatattatgctgcaaactggatacgagaactccttaacgccttcagttcccaaattgac
aaaagggatggctgcattagtcaggctacagaaaaggatgtgacaacaaagcttctgatg
cgactcagaaatctaatattattggaaagcttattgagcaatttgattacgctatctcct
cagtctctaccggagctccacccttattcagccacaagccaacatactgaccatccagag
aggaaaactgagaagaggaaactacaagatgatgatgcttcccaacgcaagggaaacatg
aaaaataaattgaaaaaatcaaagcagtcaagtgttgatgaacacttgcgacagccaact
attttggacgctttcaagaaagcaggagtagttacaagtcaaacacagctacatgaaaat
ccttccccatcatcgttagatggcaggatagcgtcagggtcaatgcatgaaacttgttct
ggtgatgaatctctaagtgtaaagattcctcaactttccccggcccttgcagcccaaaga
ttcaaattcaggcctcttcttcctcaatgcctttccatcctaaaatttccaaaggtgcag
agccaaaatatacgaaaccctgaatataaagctgagctacccctgtatttgtatctttta
caagatcttcataccaagctggatagtcttgttcctcctggtaaactacttcctttcaaa
cgtggaagccctccaggatatttaggggggttcaaattggttgaacttgtcagtcaaata
aaaggactttttccaagcctcaggatgcatttgaatacagcaatgtccttactgataaaa
ggtgaggaaactcctcaaactatttggagagatgagtttgctaaggcgggaaatccgaac
acatccaatatagtagtttctgaatctctgatttacacaatggtgtgcaaagaagtttta
ttctgtttcagcaagatgttgaccctccctgggttcgaaacagacaaatcgctgctgctg
gatcttctggaagccttccagcctaccgacattccagttgatagcttcgcggatctgcaa
cctttcccttcacctggaacaaaggactacttgtttattggcgtctattgtttctttgaa
gatattttaaacaacgcttgttccttctcgtttgatctggccttcgaatgtcttctaact
ctacaattagtggtgacctctgcacaaaaatatattggtaaggtatctgaagaagttact
aagaacagatatgtcggtcccattcagggtcttgtacccagcctgcatgccaaactggga
acttctgctgagaaacttctcaggcatgaatggattgatgaaactactgataacaagggt
ttgaagaacaaaggtgaaatggtgcagaacatattgcgaatatacctggaaaccagtgga
tccacatctgatttgctcgatgaacttgcttgtaccattttgcctcaggcctctctatcc
aagtcaacaggagaagaggatgctcatgatcatgaattccctacactatgttcagcgact
ttcagaggatggtacaagacattgcatgaagaaaatctcgcaattctcaacaaactggtg
aaggttgttagctcagagaaacggcaaaactgtcaatctgaagctaccgaagcacactta
agagacattcagaagactgtaaatgtgatagtgtctttagtcaacttgtgtcgctcgcat
gataaggttacaatccacggaatggctatcaagtatggtgggaagtatgtggactcattt
ctaaaagtttttgatttcctggaagcacatattcaagatcataacgaattagtcatccag
ctggtcaaagatctccaaaaggctacaagaacattacagactctttgttctgaagctaag
ggtatgaaacaaacagccatcaccagcaaaataccagcaacgaagcgatctttagagcgc
tttctgtttcacgtgaaggctcttctccatacaacatcacgcggctccaacttctggatg
ggtagcttgaaacacaaggacttgagaggacaaatagtgagttcgcaggcttatgtagat
aacgaaacagatgaggtagaagaagaaaccatgtccggaggagaagatcccatggaagcg
gatgaacttccctcgtcaccttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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