KEGG   Brassica rapa (field mustard): 103833875
Entry
103833875         CDS       T03449                                 
Name
(RefSeq) beta-adaptin-like protein B
  KO
K12392  AP-1 complex subunit beta-1
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103833875
Membrane trafficking [BR:brp04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    103833875
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 HEAT Alpha_adaptinC2 PDS5 HEAT_EZ Atx10homo_assoc Cnd3 Arm_2 XMAP215_CLASP_TOG DUF749
Other DBs
NCBI-GeneID: 103833875
NCBI-ProteinID: XP_009108173
UniProt: M4F2D0
Position
A09:complement(18511647..18516604)
AA seq 899 aa
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQKCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLDALKDLISDNNPMVVA
NAVAALAEIQENSTSAIFEINSTTLTKLLTALNECTEWGQVFILDALSRYKAADPREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRRAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVITDDSNQLEPSLLDELLTNISTLSSVYHKPPEAFVTRLKTTVQKTEDEDFAE
GSEAGYSSGNPADSAASPPVTMGNVAHPAGRQTAPAPAAPAPVPDLLGDLMGLDNAAIVP
VDEPTTPSGPPLPVVVPASTGQGLQISAQLARRDGQVFYSMLFENNTQAVLDGFMIQFNK
NTFGLAAAGPLQIAPLQPGTSARTLLPMVLLQNLSTGPPSSLLQVAVKNNQQPVWYFNDK
IILHALFSEDGRMERGTFLETWRSLPDSNEVQREFPGITITSVESTIDLLTAYNMFFIAK
RKNGNQDVIYLSAKVPVDVPLLIELTAVVGQPGLKCALKTPTPEIAPIFFEAVELLFKA
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgagcggtcacgattcgaaatacttctcgacgacgaagaagggagaaatccctgagctc
aaggaggagcttaattcgcagtataaggataagagaaaagatgcagttaaaaaggttatt
gcggcaatgaccgttggaaaggatgtttcatcacttttcactgatgtagtcaattgcatg
caaacggaaaatctggagctgaagaagcttgtttacctctatctcatcaattacgcgaaa
agccagccagatcttgctattcttgcggttaatacctttgtcaaggactcacaggatcca
aatccgctgatccgcgctcttgctgtgcggacaatgggctgcattcgtgtggacaaaatc
acggagtatctatgtgatcctcttcaaaagtgcctaaaggatgatgatccatatgtccgg
aagacagctgctatttgcgttgctaagctttatgacataaatgctgaattggttgaggat
aggggtttccttgacgctttgaaggatctgatatcagataataatccgatggttgttgcc
aatgctgtagcagcccttgctgagattcaagagaatagtactagcgccatatttgagatc
aatagtaccacccttacaaagctccttaccgctcttaatgaatgcaccgagtggggtcaa
gtatttatattagatgctctatcgaggtataaagcagctgatccccgtgaagctgaaaat
attgttgagagagtcacgccaaggttgcaacatgcaaactgcgctgttgtgctttcagct
gttaagatgatccttcaacagatggaactcattactagtacagacgtgattcgaaatctt
tgcaagaagatggctccaccccttgttacattgctttctgccgaacctgagatacaatat
gttgcacttcgtaacattaatcttattgttcagaaacgacccactatccttgcccatgaa
attaaggttttcttctgcaagtataacgacccaatttatgttaagatggagaagttggag
attatgataaaacttgcgtctgacagaaacatagaccaggttcttctggaatttaaagag
tatgcaacggaagtagatgttgattttgttagaagggctgttcgtgcgataggccgatgt
gctatcaaactagagagagcagccgaacgttgcatcagtgttttgcttgaattgatcaag
atcaaagtaaattatgttgttcaggaggccattattgtcattaaagatatcttcagaaga
tatccaaacacgtatgagtccataattgccacactctgtgagagtttagacactttggat
gaaccagaagctaaggcatctatgatatggatcattggtgaatatgctgaaagaattgac
aatgcggatgagctacttgaaagtttccttgagagttttcctgaggaaccagcacaggtt
cagctgcagcttctaactgccactgttaagctattcttgaagaaaccaactgaaggacct
caacaaatgattcaggttgtcttgaacaacgctactgtggagacggataatcctgatctc
agagatcgtgcatacatatactggcgtcttctatctactgatcctgaggcggccaaggac
gttgtcttggctgaaaagcccgtgattactgacgactcaaaccagctcgagccatcactt
cttgacgagctgcttacaaacatttccaccttgtcctctgtgtaccacaaaccgccagag
gcatttgtgacccgcttgaaaacgacagttcagaaaacagaggacgaggactttgctgaa
ggaagcgaagcaggatactcatctggtaatccggctgatagtgcagcttcccccccagtt
accatgggtaatgtcgcacaccctgcaggaagacaaacagcccctgcaccggcggcccca
gctcctgtacccgatctgcttggtgacttgatgggtttggataatgccgcaattgtcccg
gttgatgaacccacgactccgtctggtcctccattgccagttgtcgtgccggcttcaacc
ggtcaaggtctgcagataagtgctcaattagcccgaagagatggacaggttttctacagt
atgctcttcgagaataacacgcaggcggtacttgatggtttcatgattcaattcaacaag
aacacattcggtcttgctgctgctggacctcttcagattgcgcctttgcaaccaggaaca
tctgccaggacactgctacctatggtcttattgcagaatttgtctactggacctccgagc
tcgctcttacaagtagctgtcaaaaacaatcagcagcctgtttggtacttcaacgataag
attatacttcatgctcttttcagtgaagacggtagaatggaacgtggaaccttcctcgag
acatggaggtcgttaccagactcaaatgaagtccagagagaattccccgggatcaccatc
acgagcgtcgaatcaactattgatttgctgacagcatacaacatgttcttcatagcaaag
cgcaagaacgggaaccaagacgtgatctatttatcagcaaaggttccggtagatgtacct
ttgttgatcgaactcactgcagtggtgggacaaccaggtctcaaatgtgcattgaaaact
cccactcctgagattgcgcccatcttcttcgaagccgtcgagcttctctttaaggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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