KEGG   Brassica rapa (field mustard): 103834774
Entry
103834774         CDS       T03449                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103834774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brp03009]
    103834774
Ribosome biogenesis [BR:brp03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103834774
SSDB
Motif
Pfam: U3_assoc_6 TPR_14 Suf HAT DUF1283
Other DBs
NCBI-GeneID: 103834774
NCBI-ProteinID: XP_009109109
UniProt: M4D1N2
Position
A08:14972642..14975939
AA seq 646 aa
MADVVQYRLERMVEELDDLERRGIFTRAEISEIVKQRRKFEYRLKRPSPLKQDFLAYIDY
ESQLDELRRLRRKAVSFQSGEEKKKKKKSISDYAGVAKIVEIYRLATRRFKGDISLWFKY
LEFCRQKRNGRMKKVLAQVIRFHPKVAEVWIYAAAWEFDRNLNVAAARALMQNGLRVCPN
SEDLWVEYLRMELTYLNKLKVRRVALGEGEGSLVRDQKSVEDEQWKDENKELFMSLDDKQ
EKDKDKDGSDVEDDDEDASASERVDIFKEKGSNVLQAIYGGALEALPSSFDLRRRFLEIL
EATDLAHSDDIRNTILSDLKRDFSSDPEYWNWLARNEMNGCLSVEFASPQMQKAIQVFEE
GLQTVTSSSMFEMYIKFLMEAIERSNGDDSSGEFISHLISVYENAEGTGCLTEELANDYV
SLYLKLGRTDDALTLVEKLCSGKFAGSAKLWLSRVSIETRSLSSNSTPSKADLHSTFDLL
SNALKNVPIAESESLWLTAFKIFAEQKKYFDKLVEMSILSVAKGNNGSDPLFSLASVVVK
LVLQAKGIHRAREIYKRFVALQRPGLVFYKDCIEIETNLASQGDKDSLRNARKLYESAVA
SYSQDVELWKDYYSFETKMGTSETANGVYWRARKTLKESADFVVGS
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcggacgtagttcagtaccgcctcgagcggatggtcgaggagctcgacgacctagaa
cgcagaggaatcttcacgcgcgcagagatttcggagatcgtgaaacagcgacgtaagttc
gagtaccggctcaagcgtccgagcccgctcaaacaggactttctagcgtacatcgactac
gagtctcagctcgacgagctccgaaggttgcggaggaaggctgtttcgtttcagtctggc
gaggagaagaagaagaagaagaagtcgatttcggattacgccggcgtggctaagattgtg
gagatttataggcttgcgacgaggaggttcaaaggggatataagtctttggtttaagtat
cttgagttctgtaggcagaagaggaatggtagaatgaagaaggtcttggctcaagtaata
aggtttcacccgaaagtagctgaagtgtggatatatgctgctgcatgggagtttgatcgg
aacttgaacgttgccgcagctcgtgctcttatgcagaatggtctgagagtttgtccgaac
tccgaggacttgtgggtggagtatctgagaatggagctcacttacttaaacaagctgaaa
gttcgtagagttgcacttggtgaaggtgaagggagtttggttcgtgaccagaagagtgtt
gaggatgaacaatggaaggatgagaataaagagctgtttatgtctctagatgataaacaa
gaaaaggacaaggacaaggacggctctgacgttgaggatgatgatgaggatgcgagtgcg
agtgagagagttgatatctttaaagagaagggatctaatgttcttcaggctatttatggt
ggagcccttgaggctcttccttctagttttgacttgaggaggcgttttctggagattcta
gaggcaacagatttggcgcattcagatgatatccgcaatacgattcttagtgacctgaag
cgtgatttttccagcgaccctgagtactggaattggcttgcaaggaatgaaatgaatggt
tgtcttagcgtagagtttgcgagtcctcaaatgcaaaaggcgattcaggtttttgaagag
ggcttgcaaactgttacttcaagctctatgtttgagatgtatataaagtttttgatggag
gccattgaacggtcaaatggcgacgattcgtctggggagttcatttcacatctcataagt
gtgtacgaaaatgctgaaggaacggggtgtttgactgaggagcttgctaatgattatgtt
tctctctacttgaaactgggaaggaccgatgatgctctcacgctagtagaaaagctttgc
tctggaaaatttgcaggatcagctaagttatggctttcaagagtttccattgaaactaga
tcactttcaagtaactctactcctagtaaggcagatttgcattcaacctttgatctcctt
tcaaacgctttgaagaacgtgccgattgcagaatctgagagcttgtggcttacggcgttt
aaaatctttgctgagcagaaaaaatattttgacaagcttgtagagatgtcaatcctatcg
gttgccaaaggtaataacgggagcgaccctttgttttctctcgcatccgtagtggtgaaa
cttgttcttcaagcaaaaggaatccacagggcaagggagatatacaagaggttcgtggct
cttcaacgtccgggtcttgttttctacaaagactgcattgaaatagagacgaatcttgca
tcacaaggcgataaagatagtctaagaaatgcccggaagctttatgaatctgctgttgca
agttacagtcaagatgtggagctgtggaaagattactactcgttcgagacaaagatggga
acatcagagacggccaatggtgtgtattggcgtgcaagaaagactctgaaggagtctgcg
gatttcgtagttgggtcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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