KEGG   Brassica rapa (field mustard): 103836863
Entry
103836863         CDS       T03449                                 
Name
(RefSeq) lysine-specific demethylase JMJ25 isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103836863
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     103836863
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103836863
SSDB
Motif
Pfam: JmjC zf-4CXXC_R1 Cupin_2
Other DBs
NCBI-GeneID: 103836863
NCBI-ProteinID: XP_009111408
UniProt: M4F8I2
Position
A09:15437..22164
AA seq 887 aa
MEERKGKRIRSEEDPPRSSDKRRKTRKKEEENVVSRRGSSSSEGRRRGRDMSSSPDKDES
EGRRKYAGLTCHQCKIMMSSKTDLVFCSICVNKRYCKDCIKRWYPERTPEGVKAACPFCM
GNCNCRACLREPLAVKIQSGKDDNVKLKQLQYLLVKVLPVLRAIYTEQSRELEIEAAIRG
VPVTESDVAKCEIHPSVRIYCDLCSTSIANFLRSCQNQDCSSDICLSCCNELRDGESFSS
WKLNSDGTIPCPPKERGGCGTSTLELRRLRKRDLVQKLITDAEELTQQFKPPDVDTAHEC
SSCSDSITRQAASRKNGHDNFLYSPTALDLAEDDNAHFQSHWIKAEPVIVRNVLEKTSGL
SWEPMVMWRACREMDPKAKCKGEAKAVKAVDCLDWCEVEINIHQFFDGYLKGRMHCNGWP
EMLKLKDWPPSALFEERLPRHNDEFMSALPFFDYTDPESGIFNLATRLPDGSLKPDLGPK
TYIAYGFHEELNRGDSVTKLHCDVSDAVNVLTHTAKVDLTPRQYQKIKLEQKSYAKAQLR
KQQKNKSLGEVDKDEIILIENEEDLKNCNGLLGEHSLKDKAAKEESSYSIPGPSSSQKGE
CINIGRADDPKEGSSSLNSCTVAMESGHDTKVDVGLITQKNVTVKRESVADENHDDVCLK
TEISSPSQREADSAVENELNMPTLPSTLPQPVVSTSAESIEEEKLDAPIETNGNANESTK
AVHGGAVWDIFRREDVPKLIEYLKRHKHEFRHLYNEPVKSVSHPIHDQSMFLNERQKKQL
KEEFDIEPWTFVQHLGEAVFIPAGCPHQVRNIQSCIKVALDFVAPESVEECLRLTEEFRR
LPKDHKSNEDKLELKKIVLHAARSAIREAQDLMQTKTVTKDRKGSST
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggaggaaaggaagggtaagcgaattaggtccgaggaagaccccccgagatcttctgac
aagcgacgtaagacgaggaagaaggaagaggagaatgtcgtgagcagaagaggatcttcg
agttctgagggaagaagaagaggaagagacatgtcttcttcacccgacaaggatgagtct
gaaggaagaagaaagtatgctggtttgacttgtcatcagtgtaagatcatgatgagtagt
aagactgatcttgtcttctgttcaatatgtgtcaataagcgctactgcaaggactgcatc
aagagatggtatccagagagaacgcctgagggagttaaagctgcttgtcctttctgtatg
gggaattgcaactgcagagcttgtctgcgagagcctttggctgtcaagatacaaagtgga
aaggatgataatgtcaagctcaagcagttgcagtacctattagttaaagtccttcctgtt
cttagggctatttacactgagcaaagccgtgaacttgagattgaagcagcgattagagga
gtgcctgtgacagaatctgatgttgctaagtgcgagattcatccaagtgtacgcatatac
tgtgacctctgcagcacatccattgccaattttctcagaagctgtcagaaccaagattgt
tcatcagacatatgtctctcttgctgcaatgaactgagagatggggagagtttctctagc
tggaagcttaactctgacggtaccattccctgccctccaaaggaacgtggtggttgtggt
acctcaacactggagttgagacgtttgcgcaaacgtgatttggtccaaaaactgataacc
gatgcagaggaacttactcaacagtttaaaccaccggatgtggatactgctcatgaatgt
tcctcatgttctgattccattacaaggcaggcggcttctaggaagaacggtcatgataac
ttcttatactccccaaccgctcttgatctagctgaagacgacaatgctcattttcagtcg
cattggataaaggcagagcctgttatagtcagaaacgttctggagaagacgtctggacta
agctgggagccaatggttatgtggagagcctgtagagaaatggatccaaaggctaaatgc
aaaggagaggccaaagctgtgaaggctgtggattgcttggactggtgtgaggttgagata
aacattcatcagtttttcgatggctacttaaaagggagaatgcattgcaacggttggcca
gagatgttgaaactgaaggattggcctccatcagctttgtttgaagagcgtcttccaagg
cataatgatgagtttatgtctgcgttgcctttctttgattacactgatccagagtctggt
atcttcaatcttgcaacaagacttccagatggatccttgaagccagatcttggaccaaag
acatatattgcttatggtttccatgaagagcttaatagaggagactctgtgacaaagcta
cattgtgatgtttctgacgcggtgaatgtgctgacacacactgctaaagtggatttaact
cccagacaataccaaaagataaaattagaacagaaaagctacgcaaaagcacaattgcgt
aaacaacagaaaaacaagtcactgggagaagtggataaagatgaaataatcttgattgag
aatgaggaagatttaaagaattgcaatggtcttttgggggaacacagcttgaaggataaa
gcagctaaggaagaatcatcatatagcattcctggaccgtccagctcacaaaaaggtgaa
tgtattaacattggaagagctgatgatcctaaggaaggatcttctagtttgaattcttgc
actgttgctatggagtcaggtcatgatacaaaggtggatgtgggtttgataactcagaag
aatgtaacagtgaaacgcgaatcagttgctgacgagaatcatgatgatgtctgtttgaag
acagagatatcatctccaagtcaaagagaagctgattccgcggtggagaatgaactaaac
atgccaacacttccttctactcttccacaacctgttgtgagtacaagtgcggaatccata
gaagaggagaaactagatgctccaatagaaactaatggcaatgccaatgagagtacaaag
gctgtgcatggtggtgctgtgtgggacatcttccgaagagaggatgttccaaaacttatc
gagtatttgaaaaggcacaagcatgagtttcgtcacctctataacgaacctgtgaaatct
gtgtcacacccaattcatgaccagagtatgttcttgaatgaaagacagaagaaacagctg
aaggaggagtttgatatagaaccatggacctttgtgcaacacctcggtgaagctgtcttt
atccctgccggttgtcctcaccaagtgaggaacatacagtcttgcataaaggtggcatta
gattttgttgctcctgaaagcgtagaggaatgccttaggctaacagaggagttccggaga
ctacctaaagaccacaaatccaacgaagataaactagagcttaagaaaatagtgctgcat
gctgccagatcggccataagagaggcacaagatctaatgcaaacaaagacggtaacaaaa
gaccgaaaaggttcttcaacttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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