KEGG   Brassica rapa (field mustard): 103837192
Entry
103837192         CDS       T03449                                 
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1 isoform X2
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    103837192
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:brp01007]
    103837192
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brp03016]
    103837192
Enzymes [BR:brp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     103837192
Amino acid related enzymes [BR:brp01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   103837192
Transfer RNA biogenesis [BR:brp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    103837192
 Prokaryotic type
    103837192
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon TGS tRNA_SAD
Other DBs
NCBI-GeneID: 103837192
NCBI-ProteinID: XP_009111770
UniProt: M4F687
Position
A09:complement(3179172..3184614)
AA seq 707 aa
MLLRLLVRSISRYASPPSRLASTSSFCTLPTMSTNHPKNESYLSAVIPKRIKLFEQIQSH
QLEKLKSLPHDPIKITLPDGTVKEGRKWETTPMDIAGEILKGLANSALISSVNDELWDMS
RVLEGDCKLELFKFDSDKGRDTLWHSSAHVLGQALEQEYGCQLCIGPCTTRGEGFYYDAF
YGDLGLNDNHFPNIEVGAAKAAKEAQPFERIEVTKDQAIEMFSDNNFKVEIINDLPADKT
ITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYWRGSKDRESLQRVYGISYPDQKQL
KKYLQFLEEAKKYDHRLLGQKQELFFCHPLSPGSWLFLPLGTRVYNKLMEFIKEQYWKRG
YAEVITPNMYNMNLWETSGHVANYKENMFTFDIEKQEFGLEPMNCPGHCLMFQHRVRSYR
ELPIRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTEDQATDEVKAVLEFIDYAYK
IFGFTYELKLSTRPEKYLGDLAAWDKAENDLKIALDAFGKTWVLNEGDGAFYGPKIDITV
SDAMNRKFQCATLQLDFQLPDRFKLEYSADDEAKRQRPVMIHRAVLGSVERMFAILLEHY
KGKWPFWLSPRQAIVCPISKKSEEYALQVKKQIHEAGYYVDADITDRKIDKKVREAQLAQ
YNYILVVGETEAATGQVSVRIRDSAAHSVKSIENLLEEFKTKTAEYQ
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgctcctccgtcttttggttcgttctatcagtcgttacgcatctccaccgtctcgctta
gcctctacgtcgtcgttttgcactctcccaacaatgtcaaccaaccacccaaagaacgag
tcctatctctccgccgtcatccccaagcgcatcaagctcttcgagcagatccaatcccac
cagctcgagaagctcaaatctctcccccacgacccaatcaagatcacgttacctgatggg
accgtgaaagaagggaggaagtgggagactactccgatggacatcgccggggagattttg
aaggggttggctaactctgcgttgatttcatcggttaatgatgagctttgggatatgagt
agggtgttggaaggtgattgtaagcttgagttgtttaagtttgatagtgacaagggacgg
gatactctttggcattctagtgctcacgttcttggtcaggctcttgagcaggagtatggg
tgtcagctgtgtataggaccgtgtactacgagaggggagggtttctactatgatgcattt
tatggtgacttggggctgaatgataatcacttccctaatatcgaagttggtgctgcaaaa
gctgctaaggaagcgcaaccatttgaaaggattgaagtgacgaaagatcaggcgattgag
atgttttctgataacaactttaaggttgaaatcatcaatgatttacctgccgacaagacc
attactgtctatagatgtggtcctctcgttgatttgtgccgtggaccgcacataccaaac
acttcttttgtgaaagcattcaagtgtttgagggcctcatcagcttactggaggggtagc
aaagaccgtgagagcttgcagagggtttatgggatatcttatccagatcagaaacagttg
aagaaatatcttcagtttcttgaagaagccaagaagtatgaccatagactattgggccaa
aagcaggaacttttcttctgtcacccactcagccctgggagttggttattccttccactc
ggcactcgcgtttataacaagttgatggaattcattaaggagcaatattggaaaaggggt
tacgcagaggttataacaccaaatatgtacaacatgaatctgtgggaaacttctggacat
gttgcaaactacaaggagaatatgtttacttttgatattgagaagcaagagttcgggctc
gaacctatgaattgtcctggtcactgcttgatgttccaacacagggttcgttcatacaga
gagttacctattagactggctgactttggagtgttacaccgcaatgaggcaagtggagca
cttagtgggctgactcgtgtccgacggttccagcaggatgatgcacacatattctgtaca
gaggatcaggccacggatgaagtgaaggctgtgttggagttcatcgactatgcttacaaa
atctttggctttacctatgagctaaagctttcaacgaggccagaaaagtacctcggagat
ttggcagcatgggataaagctgaaaatgatctcaaaatagccctagacgcttttggaaag
acatgggtgttgaacgaaggagatggtgcgttctatggcccaaagatagacatcacagtt
tctgatgcgatgaacagaaaattccagtgtgcaactttacagcttgattttcaacttcct
gatcgcttcaagctggaatactctgctgacgacgaagcaaagaggcagagacctgtgatg
attcatagagccgtgttgggatctgtggagcgtatgtttgccatattgctggagcattac
aaagggaaatggcccttctggcttagtcctcgccaggccatagtttgccctatatccaag
aaatctgaggaatatgcattacaggtgaagaaacaaattcatgaagctgggtactatgtt
gatgcggacataacagacagaaagattgataaaaaggtgcgagaagctcagcttgctcag
tacaactacatacttgtggttggtgaaaccgaagctgctacaggacaggtgagtgttcgg
ataagagacagtgcagcccactcggttaagagcatcgagaatttgctggaagaattcaag
accaagactgctgaatatcaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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