KEGG   Brassica rapa (field mustard): 103841655
Entry
103841655         CDS       T03449                                 
Name
(RefSeq) polygalacturonase ADPG1 isoform X1
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00040  Pentose and glucuronate interconversions
brp01100  Metabolic pathways
Module
brp_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    103841655
Enzymes [BR:brp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     103841655
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 End_N_terminal
Other DBs
NCBI-GeneID: 103841655
NCBI-ProteinID: XP_009116451
UniProt: M4CSZ0
Position
A09:complement(36242860..36248153)
AA seq 432 aa
MARCCVPLAIFLGVLLMLSWCEALSSNVDDGYGHEDGRYESDSLIKLNNDDVLTLKSSDK
PTPESSTVSVSDFGAKGDGKTDDTQAFKKAWKKACSTKEVTSFLVPKGKTYLLKSTQFRG
PCKSLRSFQILGTLSASTKRSDYNKDKNHWLILEHVNNLSVDGGSEGTVDGNGKIWWQNS
CKIDRSKPCTKAPTALTFYNLMNLNVNNLRVRNAQQIQISVEKCNNVNIKNVEITAPGDS
PNTDGIHITNTQNIRVSNSHIGTGDDCISIEDGSQNVQINDLTCGPGHGISIGSLGDDNS
KAYVSGVNVDGAKLTETDNGVRIKTYQGGSGTAKNIKFQNIRMQNVKNPIIIDQNYCDKD
KCEQQDSAVQVDNVVYRNISGTSATDVAITFDCSEKYTCKGIVLDNVNIKGGTASCKNAN
VKNQGYVSPQCS
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcacgttgttgcgtacctcttgctattttcttaggcgttcttttgatgctctcgtgg
tgtgaagctttgagtagcaacgttgatgatggatatggtcatgaagatggaaggtacgaa
tccgatagcttaatcaagctcaacaacgacgacgttcttaccttgaaaagctccgataaa
cccactcccgaatcatcaactgttagtgtatcagacttcggagctaagggagatggaaaa
accgatgatactcaggccttcaagaaagcatggaagaaagcatgttcaacaaaagaagtt
actagcttcttggttcctaaagggaagacttatctccttaagtctactcagttcagaggc
ccatgcaaatctttacgtagctttcagatcctcggaacattatcagcatctacaaaacga
tcggattacaacaaagacaaaaaccattggcttatattggagcacgttaacaatctatca
gtcgacggcggctccgaggggactgttgatggaaacggaaaaatctggtggcaaaactca
tgcaaaatcgaccgatctaagccatgcacaaaagcgccaacggctctaactttctacaac
ttaatgaacttgaatgtgaataatctgagagtgagaaatgcgcagcagattcagatttcg
gttgagaagtgcaacaatgttaatataaagaatgtcgagatcactgctcctggcgatagt
cccaacacggatggtattcatattactaacacccaaaacattcgagtctccaattcacac
attggaacaggtgatgattgtatatccattgaggatggatcccaaaatgttcaaatcaat
gatttaacttgtggccccggtcacggaatcagcattgggagcttgggggatgacaattcc
aaagcttatgtctcgggagttaatgtggatggtgctaagctcactgagactgacaatgga
gtaagaatcaagacttatcagggagggtcaggaactgccaagaacattaagtttcaaaac
attcgtatgcaaaatgtcaagaatcctatcataatcgaccagaactactgcgacaaggac
aaatgcgaacaacaagactcagcggtgcaagtggacaatgtggtgtaccggaacataagc
ggtacgagcgcaaccgatgtggcaataacgtttgattgcagtgagaaatatacatgcaaa
ggtattgtgcttgacaatgtgaacatcaaaggaggaacagcatcttgcaagaatgcgaac
gttaagaatcaaggctacgtttctcctcaatgctcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system