KEGG   Brassica rapa (field mustard): 103843376
Entry
103843376         CDS       T03449                                 
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X2
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03030  DNA replication
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103843376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103843376
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     103843376
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    103843376
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     103843376
SSDB
Motif
Pfam: Dna2 AAA_12 AAA_11 AAA_19 AAA_30 PDDEXK_1 UvrD-helicase Cas_Cas4 UvrD_C ResIII nSTAND3 Dna2_Rift Helicase_RecD AAA_18
Other DBs
NCBI-GeneID: 103843376
NCBI-ProteinID: XP_009118343
Position
A09:43400311..43409753
AA seq 1322 aa
MPPRKKPKSSASKTNKQSSANQSSQPSSVGIQQLFQRHIQNSQSTSNSLASNPVVSTPQN
PLSRVDEKPDESKDVDQGGLTEASPEVSRNAKRFKFSPGMLIKQSQDDGGEEITWKISPI
DQRLRAAAKQVPKMMDLTENSVGFKSSTLRPCSLDKVVQKQCPTSDITSKVEQWLSSPSK
KAFKRPALPANRVTERVNPSLDGEFEIVNTSSSGNSPFQTPPSLSCSHNKLPCTVTCSAA
CGSTGTGQHKKALLELLDQVEDVISVDEKTADEVGTVVPQIRLEEDKICSVGVYNAVDEK
PIALLKKNNSANPDSYFLVLEVSEKRGFAGSSRVQSPYKVLRLLDEHTGKECALYLWDEW
FYSTVSPGDSINVIGDFDGEGKCDVDHQNNFLIVHPDTLVAGTKVAASFGCPRRTVLDER
LRSNEHATAALLGTLLHQVFQAGLTQESPSADGLQEYASIVIKNNIESLYACGVHERGVK
ATLHEAIPKMLNWIHHFRDSKDSTISNVDFGSTNGQRMVKISEVIDIEEMSWAPKYGLKG
MVDASVRVIVGSDMNTANEKIMPLEFKSGKAPNGQASMEHCAQVILYTLLMSERYLKHID
NGLLYYLQSDQTQGISVQRSDLVGLIIRRNELANDILVASTTQQLPPMLRNPNMCRNCRH
LDACTIYHKADGGNTESSGLADLFDAHVSHLSTLHFKFIRHWNRLIDLEAREMKLPRKDI
AHPRGSKGSDSASYLSSMVLDMKDGFQHHSSHKDSRFIYRFVRQNLSESRERVPSEDTTR
TGKPSADDLDCKLRPGDRVILRTEVSHLTVANGIIAEISRTHVSVSLSKRLRLPWSEPSS
EVSNLSNESWRIYKDEYMTSFSIMRFNLMQLFIQSVHTIGIRKMIVDLEPPRFDNGSILS
QDPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSI
LLASYTNSAVDNLLIKLKAQGIEFLRIGRDEAVHEEVRESCFSAMDMCSVDEIKTKLDQV
KVVASTCLGINSPYLVNRRFDVCIIDEAGQIALPVSIGPLLFASTFVLVGDHYQLPPLVQ
STEARENGMGISLFRRLSEAHPQAISMLQNQYRMCRGIMDLSNALIYGDRLCCGSAEVAN
ATLFLSTSSSNSPWLRKVLEPTRTVVFINTDMLRAFEARDQNAINNPVEASIIAEIVKEL
VNNGVDSKDIGIITPYNSQASLIQHAIPTASVEIHTIDKYQGRDKDCIIVSFVRSREKPR
NSGSSLLGDWHRINVALTRAKKKLIMVGSQRTLSKVPLLMLLLKKVKEQSGILTLSPGDL
KP
NT seq 3969 nt   +upstreamnt  +downstreamnt
atgccgccgaggaagaagccaaagtcttcagcttcgaaaacaaacaaacaatcttcagcc
aaccagtcctcacaaccttcaagcgttggcatccagcagctcttccaaagacatattcag
aactcccaatcaacttccaactctcttgcctctaaccccgtagtctcaacgcctcaaaat
cctctgagcagggtcgatgagaagcctgatgagtccaaagatgtggaccagggaggactc
acggaggcgtctcctgaggtctccagaaacgctaagcgcttcaaattctctcctggaatg
ctgataaagcaaagtcaagatgatggtggcgaagagataacttggaaaatatctcctata
gatcaaagacttcgcgcagctgctaagcaggttcctaagatgatggacttgactgaaaat
tcagtgggatttaaatcttctaccctacgcccatgctctctggacaaggtagtgcagaaa
cagtgtcctacatctgatataacttccaaggtggagcagtggttatcatccccctccaag
aaagctttcaaaagaccagctttgccagcaaatagggtcacggaaagggtgaatccttcc
ctagatggggagttcgagattgttaacacttctagtagtggaaacagtcctttccagacc
ccaccgtcactttcatgctctcacaacaagcttccttgtactgtaacatgcagtgcagct
tgtgggtccacgggcactgggcaacataaaaaggccttgcttgaacttctagatcaagtg
gaggatgtcatctcagttgatgaaaaaacagctgatgaagtggggactgtggttccccaa
attcgacttgaagaagataaaatctgttccgttggtgtctacaacgccgtagacgaaaag
ccaattgctctactaaaaaagaataattctgcaaatccagatagctatttccttgtattg
gaggtatctgagaaacgtggcttcgctggctcatctagggttcagtctccttataaggtt
cttcgcctgctagacgagcacactggaaaagaatgcgctttatatctctgggatgaatgg
ttttacagcactgtatcaccaggagattcaatcaatgttatcggagattttgacggggag
ggcaagtgtgacgtagaccaccaaaataatttcttaattgttcatcctgacacccttgtt
gctggaactaaggttgcagcaagttttggttgcccaaggagaaccgtgctggatgagagg
ctaagatccaatgaacacgctacagctgccttgcttggaaccttgctgcaccaagttttt
caggcaggtctcacgcaagagtctccatctgcagatggtttgcaggaatacgcgagcata
gtgattaagaataatattgagagcttatatgcatgtggagtgcatgagcgaggcgtgaaa
gcaaccttacacgaagctatcccaaaaatgttgaattggattcatcacttccgagattcg
aaggactcaacaatatcaaatgttgattttgggtctactaatgggcagcgaatggtaaag
atatcagaggtaattgacattgaggagatgtcatgggcccctaaatatggtctgaaagga
atggtcgatgcttcagtcagagtgatagttggatctgacatgaacacagcgaatgagaaa
ataatgcctcttgagtttaaatctggaaaggctcccaatgggcaggcatcaatggaacat
tgtgcacaggtgatcttgtacacgctccttatgtctgagaggtacctaaagcatattgac
aatggccttctgtattatctacagtcagatcagacacagggaatttctgttcaaagatca
gatttggtgggtttgattattcgtcgtaatgaacttgcaaatgacatcctcgtggcatca
acaacccaacaattgccaccaatgttacggaatccaaatatgtgtcgtaactgtcgccat
ctggacgcctgcacgatttatcataaggcagatggtggaaacacggagagtagcggactt
gctgatctctttgacgcacatgtatctcatctttcaactttgcattttaaattcatacga
cactggaacagactgattgacttggaagctagagagatgaagcttccaaggaaagacatt
gcacatccacgtggttcaaagggcagcgactcagccagttatctttcttctatggttctt
gacatgaaagatgggtttcagcatcatagctctcataaagattctagattcatttatcgt
tttgtacgtcaaaacttatctgaatctagagaaagagtacccagcgaagatacgactagg
actggaaagccttcagctgatgacctggattgcaaacttagaccaggagaccgcgtgatt
cttcgcacagaagtcagccacctaaccgttgcaaatggaattatagcagagattagtcgc
actcatgtatcagtttctttatccaagcgattacgtcttccttggagcgagccttcttct
gaggtgtccaatctctctaatgagtcatggcgaatttacaaagatgaatacatgacatca
ttttcaattatgaggttcaatctcatgcagcttttcatacaaagcgtacataccattggc
atcaggaaaatgattgtggatcttgagcctcctaggtttgacaatggatctatactgagc
caggatccagcaatatcatatatttggtcagaaaagagcttaaataatgatcagcgtcaa
gctatactaaagatactcactgcaaaggactatgcgttgatcttaggaatgcctggaaca
ggaaaaacctccacaatggttcatgctgtgaaagctttgttgatcagaggctcatctatt
ctgctggcatcgtacacaaactctgcagttgataatctacttatcaaattgaaagcacag
ggaattgagtttttacgtattggaagagacgaggctgtacacgaagaagttcgagaaagt
tgcttttcggctatggatatgtgcagtgtcgacgagatcaaaacaaagttggaccaggtc
aaagttgtggcctctacatgtctgggaatcaatagtccctaccttgtgaataggcgtttt
gacgtttgcattattgatgaagccggccaaattgccctccctgtatcaataggacctttg
ctgtttgcctctacatttgtacttgttggtgaccactatcaactaccgccactagtgcag
agtacagaggctagagagaatgggatggggataagcttgtttcgtaggttatcagaagct
catccccaggcaatttcaatgttacagaaccagtaccgaatgtgtcgaggtattatggac
ctatcaaatgccttgatatatggagatagattgtgctgtggttccgctgaagtagctaac
gccacactttttctttctacttccagttctaattcgccatggcttagaaaggttctggag
ccaaccagaacagttgtatttattaacacagatatgctgcgtgcttttgaagccagggat
cagaatgcgatcaacaatccagttgaagcttcaataatagctgagattgtgaaggagcta
gttaacaatggagtggatagtaaagatattggaatcattactccttataactcacaagcg
agcctcattcaacacgccattccaacggcgtctgtggagatacatactattgacaagtat
cagggaagagataaagactgcataatagtttcatttgtgagatcgcgagagaaaccaagg
aactctggttcttcactgctcggagattggcataggatcaacgttgctttgacacgagca
aagaaaaagttgataatggtgggatcacaaagaacactatcaaaagttccactcctgatg
cttctactgaagaaggttaaggagcagtcaggtatcttgactctttctccgggggaccta
aaaccataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (14)   
   Pfam (14)   
All databases (34)   

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