KEGG   Brassica rapa (field mustard): 103849010
Entry
103849010         CDS       T03449                                 
Name
(RefSeq) polygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00040  Pentose and glucuronate interconversions
brp01100  Metabolic pathways
Module
brp_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    103849010
Enzymes [BR:brp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     103849010
SSDB
Motif
Pfam: Glyco_hydro_28 AsmA_2
Other DBs
NCBI-GeneID: 103849010
NCBI-ProteinID: XP_009124086
UniProt: M4FG11
Position
A01:27707022..27708817
AA seq 397 aa
MGSYLGIYTILVLCLLGYSANAEVFTAGGPPNSDITAAVLKAFTSACQAPAPSQVLIPKG
DFKLGETVMTGPCKSPIEFTLQGNVKADGGSTQGKDRWVVFEKINGFKLNGGGTFDGEGN
AAWKANNCHKTFECKKLPISVRFDFVDNAEIKDITSLDAKNFHFNVISGKNMTFDNIKII
APAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSL
GRYGWEQDVTDINVKNCTLEGTDNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILID
QEYCPWNQCNKNKPSTIKLVDITFRNIRGTSGNKDAVKLLCSKGHPCENVEIGDINIDYT
GPDGPPTFECTNVTPKLVGTQNPKACVGPVVKAPGKE
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgggttcatatttgggaatctatacaattttggttctatgtttgctaggatattcggcc
aatgctgaggtgttcactgctggtggtcctccaaattctgatattaccgcggcagttctt
aaagcattcacatcggcatgtcaagctccggcaccaagccaggtgctgatcccaaaaggt
gacttcaagcttggtgagaccgtgatgactggtccatgcaaatctccaatcgagttcacc
ttgcaaggcaacgtgaaagctgacggtggctctacccagggaaaggatagatgggttgtg
ttcgaaaaaattaatggttttaagttgaacggaggtggaacatttgacggtgaaggcaat
gcagcttggaaagccaataactgccacaagacttttgagtgcaagaaacttcccatcagt
gtaaggtttgattttgtggataacgctgagataaaagacataacctcattagatgccaaa
aacttccacttcaacgttatcagcggcaagaacatgacctttgataacatcaagatcatc
gctccagctgaaagccccaacactgacggtatccatttgggaagatgtgagggagtcaag
atcctcaacactaagatcgccacaggagatgactgcatctccgtgggagatgggatgaag
aatctcctcattgagaaagttgtgtgcggtccaggacacggaatcagtgttggaagcctt
ggaaggtacggatgggagcaagatgtcactgacattaacgttaagaactgtaccctcgag
ggaaccgacaacggtctgaggatcaagacatggccatctgccgcttgcaccaccactgct
gccggtattcattttgaggatatcatccttaacaaagttagcaacccaatcctcatcgac
caggagtactgcccttggaaccaatgcaacaagaacaaaccatcaacaattaagctggtg
gacattaccttcaggaatattagaggaacatcagggaacaaggacgcagtgaaactattg
tgcagcaagggacatccatgtgagaacgttgagattggagacattaacattgactacaca
ggacctgacggtccacccactttcgagtgcacaaacgtcacacctaagcttgtgggaacc
cagaacccaaaggcttgcgttggacctgtggtcaaggctcctggcaaagagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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