KEGG   Brassica rapa (field mustard): 103850463
Entry
103850463         CDS       T03449                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X2
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103850463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103850463
Enzymes [BR:brp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     103850463
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  HECT type E3
   103850463
SSDB
Motif
Pfam: HECT DUF4865
Other DBs
NCBI-GeneID: 103850463
NCBI-ProteinID: XP_009125465
Position
A02:372989..380523
AA seq 1476 aa
MENRGQKRMEVVGEPPADKRACNSQDFTSGASSAQAQQANGNTDADMDTSSSASPSSRSD
GEQDREEEEEEESDYGSCDSDDEDPRRRVLQRYQRGRSTGDQLKLKSLASRLSEENDPSL
QLTGLTELCEVLSFCTEDSLSIVMADLLSRVLVKLAKHESNADIMLLAIRAVTYLSDVYP
RSVAFLVKHETIPALCQRLLTIEYLDVAEQCLQALEKISRDQPVACLNAGAIMAVLSYID
FFSTSIQRVAVSTVVNICRKLPPEPPSPVMDAVPVLCNLLQYEDRQLVESVAICLTKIAD
QVSQSPAMLDQLCSHGLIHQSTHLLNLNSRTTLSQPVYNGVIGLLRKLSSGSTLAFRTLY
ELNIGYRLKEIISTYDISHSVSSTQPIHPCSNQVHEVLKLVIELLPASPVGDNQLALEKE
SFLVDQPNLLQQFGADMLPVMTQVLKSGASVYVSYGCLSAIHKLTCLSKSDDLVELLNNA
NISSVLAGIFSRKDHHVVVVALQIAEVLLEKYRDAFLNSFIKEGVFFAIAALLTSDRGQQ
INPVSGFIQGSVPKEIVKCLCQSFEGSVSSSSQTCKVGNDSVYILATRIKESFFGPEVFD
SQKGLTDVLQNLKNLSAELNDLVTVPVDAHVLHGERFFSIWNQIMARLKERESVSTFEFT
ESGVVKALANYLSNGLYERKLNKGDPECDSLPLVGNRFEVFTRLLWSDGEATPSALIQKL
QNSLSSLENYPIVLSQFLKQRNCFAAIPNGRCISYPVLRVRFAKAEGETCLRDYSPNFVT
VDPLCYLDAVSQCLWPQVNLEPLNSVEAKDQAIECQSSQLQSTSISCQGESSSHMEIDCP
NASQLQEDQYHLIDSGEENSSSSKEEDVRPRLLFRLEGLELDPSLTVYQAILSHKLKSEN
ETTNDSKLSGHHTITYERAPQLAVSHENLFPLRSMDNDEHHPFLSYLFAHRLGLRHKGTS
PPEYAILFLLKSLEGMNRFLFQLICHERINAFGEGRLESLDDLTVQVRPVPYAEFVSSKL
TEKLEQQLRDSFAVSPCGLPPWFNDLMASCPFLFSFEVKSKYFRLAAFGPQQVHNQPQHL
GSSNVHGSLPRKKFLACREKILESAAKMMELHGTQKVAVEVAYSEEVGTGLGPTLEFYTL
VSRAFQNPDLGMWRSDPSSLAGKPMVPPSGLFPRPWSATSAAFPGVLQKFVLLGTVVAKA
LQDGRVLDIPFSKTFYKLILGQELSSFDIHFVDPELCKTLVELQALARRRKVISESQSDV
RAAKCDLSFRGTKIEDLCLDFSLPGYTDYVLSPRFANDMVNLGNLEEYVKAIVNATVCNG
IKKQVEAFRSGFNKVFPIEHLKIFNEEELETLLCGERDLFNMNEVLDHIKFDHGYTSSSP
PVQNLLEILHEFHKEQQRAFLQFVTGCPRLPPGGLASLSPKLTIVRKHGSDSSETDLPSV
MTCANYLKLPPYSSKEKMKEKLIYAITEGQGSFHLS
NT seq 4431 nt   +upstreamnt  +downstreamnt
atggagaacagaggacagaaacgaatggaggttgtgggggagccacctgctgataagaga
gcttgcaactcacaagacttcacatctggcgcctcctctgctcaggctcaacaagccaat
ggtaacactgatgctgacatggacacttcttcctctgcctctccttcgagtcgttcagat
ggagaacaagacagggaggaggaggaggaggaggaatccgactacggatcatgcgattcc
gatgatgaggatccgaggaggagggtgcttcagcggtatcagagggggagatcaacagga
gatcagctgaaactgaagtctctcgcgtcgaggttgagtgaagaaaacgatccttctctg
cagttgactggtcttacggagctctgtgaagtgttgtctttctgtactgaggactctctg
tccattgtgatggctgacttgctctcgcgtgtgcttgttaagttggctaagcatgagagc
aatgcagatatcatgctgctcgcaatcagagcggttacttacttgtctgatgtttatccg
cggtcggtagcgttccttgttaaacatgagaccattcctgctctctgccaaagactactg
acgattgagtacttggatgttgctgagcagtgtttgcaagcacttgagaagatatccaga
gatcagccggtagcatgcttgaacgctggagcaattatggcagtgctttcgtatatcgat
ttcttttcaacaagcatacagagagtcgcagtttctactgtggtgaatatatgtaggaag
cttccacctgagcctccctcgcctgtcatggatgctgttccagtattatgcaatcttctt
caatatgaagaccgacagttggtggagagtgtcgctatttgcttgacaaaaatagcagat
caagttagccagtcgcctgctatgttggatcaactatgtagccatggacttatccatcaa
tcaacacatcttttaaacttgaacagccgcacaaccctatctcaacctgtttacaacggc
gtgattggattgctaagaaaactatcttctggttcaactttagctttcagaacattgtat
gagcttaacattggctacagactaaaagaaatcatatccacctatgacatttctcattca
gtttcttctacacagcccatccatccatgctccaaccaggtgcatgaagtcttgaagttg
gtgattgagcttcttccagcttcacctgttggggataatcagctggcattagaaaaggaa
agttttcttgtcgatcagcctaatctcttgcaacaatttggagcagacatgcttcctgtt
atgactcaggtgctaaagtctggagctagcgtttatgtttcttatggttgcctatcagca
attcacaagctgacttgcttaagtaagtcagacgatcttgtcgagttactgaacaatgct
aacatttcaagtgttttggcgggcattttttcaaggaaagatcatcatgtggtcgttgtt
gcactacagattgctgaagtgcttcttgagaaatacagagatgcttttttgaattccttt
ataaaagagggtgtttttttcgcaatcgcagcactcctaacttctgataggggacaacag
atcaatccagtatccggtttcattcaaggatctgttccgaaagagattgtgaaatgcttg
tgccagtcttttgaaggatcagtttcctcttcttcacaaacttgcaaggttggaaatgat
tctgtctacatcctcgcaacacgtatcaaggagagtttctttggacctgaggtattcgac
tctcagaaaggcttgacggatgtcctccagaacctcaagaatctgtcggcagaactcaac
gatttggtgactgtacctgtcgatgcgcatgtcctgcatggtgagaggttcttctcaata
tggaatcaaatcatggcaaggctgaaagagagggaatctgtgtccacttttgaatttact
gagagtggagttgtgaaggctctggcaaattatctgtctaatggactctacgaaaggaaa
cttaacaaaggcgatcctgaatgtgatagtttaccacttgttggtaacagatttgaagtg
ttcacaagactactttggtctgatggcgaggcaactccgtccgctttaatacagaagctc
caaaattccttatcttctttagaaaactacccaattgtcctgagccagtttttgaagcaa
aggaactgtttcgctgctattccaaatggacgttgcataagttatccagtcctaagagtt
cgttttgctaaagcagagggggagacttgtctgcgtgattactctccaaactttgtcacc
gttgacccactttgctacttggacgctgttagtcagtgcctgtggccccaagtgaatttg
gaacctttaaattctgtcgaagcgaaagatcaggctatagaatgtcaatcttcacagctg
cagtcaacttcgatatcttgtcaaggtgaaagctcaagccatatggaaattgactgtcct
aatgcatctcagctgcaggaagaccaatatcaccttatagattcaggagaagagaattct
tcctcatctaaagaagaggatgtgcgacctcgacttttgtttcgtctggaagggcttgag
ctagacccctctttgactgtttaccaggcaattctctcgcacaaactaaaatcagaaaat
gagactaccaacgattcaaagcttagtggacaccacaccatcacttacgaaagagctcca
cagcttgcagtgtctcatgaaaatctgtttcccctcagatctatggacaacgacgagcat
cacccgtttttatcctacttgtttgctcatagacttggtttgcgccacaaagggacaagt
cctcctgagtatgccatattgtttctgctcaagagtctggagggcatgaacagatttctc
tttcagctgatttgtcatgaaaggattaatgcttttggggaaggtaggctggagagtttg
gatgatctaactgtgcaggtgcgtccggtgccatatgctgaatttgttagctctaagctt
acagagaagttagagcagcagctgcgtgattcttttgctgtgtcaccgtgcggtctacca
ccgtggtttaatgatctaatggcttcatgcccgtttctgtttagttttgaagtcaaatct
aaatacttccgacttgcagcgttcggtccacagcaagtccataatcagccacagcacctt
ggtagttcaaatgttcatggtagtttacctcgtaaaaagtttttagcttgccgtgaaaag
attctagagtctgctgcgaaaatgatggagttacacggcacccagaaggtggccgttgag
gttgcgtacagtgaagaagtcggaactggccttgggccaacgctggagttctacacactt
gtcagtagagcatttcaaaatccggatcttggtatgtggaggagtgatcctagctccttg
gctggaaagccaatggtacctccttcaggactctttccacgcccttggtcggctacatca
gctgcttttccaggtgtgctgcagaagtttgttctcttggggacagtggtagccaaggct
ctacaagatggacgagtcttggacattcctttctctaaaaccttctataaactaattctc
ggacaggagttgagttcatttgacatccatttcgttgaccctgaactttgtaaaacactg
gtggaattgcaagctctggcacgtaggagaaaggttatctcagaatcacaaagtgatgtc
cgagcagctaagtgtgacttgagtttccgtggaacaaagattgaggacctttgtcttgat
ttttccctgcctggctacacggactatgttctctctcctcggtttgctaatgatatggta
aatttgggtaacctcgaggagtatgtaaaggctattgtcaatgccacagtatgtaatggg
atcaaaaaacaagtggaagcgtttcggtctggatttaacaaagttttccctattgaacat
cttaagatatttaatgaagaagaactggaaactttgttgtgtggagaacgagatctcttt
aatatgaatgaagtcttggaccacatcaagtttgatcatggttatacttctagcagccca
ccagttcaaaatttgttggagattctgcatgagtttcacaaggagcaacagcgagctttt
ctgcaatttgtaacaggatgtcctcggctaccccctggcggtttggcgtctctcagtccc
aaacttaccattgtccgcaagcacggtagtgattcatcagaaacagacctgcctagtgtg
atgacctgcgccaattatctgaaacttccaccttactcttccaaagaaaagatgaaggag
aagctgatctatgccataactgaagggcaaggttccttccatctctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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