KEGG   Brassica rapa (field mustard): 103852517
Entry
103852517         CDS       T03449                                 
Name
(RefSeq) tRNA(adenine(34)) deaminase, chloroplastic
  KO
K11991  tRNA(adenine34) deaminase [EC:3.5.4.33]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brp03016]
    103852517
Enzymes [BR:brp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     103852517
Transfer RNA biogenesis [BR:brp03016]
 Prokaryotic type
  tRNA modification factors
   Deaminases
    103852517
SSDB
Motif
Pfam: MafB19-deam dCMP_cyt_deam_1 Bd3614-deam SNAD4 APOBEC2 Inv-AAD NAD2
Other DBs
NCBI-GeneID: 103852517
NCBI-ProteinID: XP_009127662
Position
A02:10482623..10487223
AA seq 1282 aa
MFNTYTNSVLWPRNHHGYSSLLPERSESHRFAKPSPKCCCAASLSRCCCCSYSAPSFVKP
KVSINPGFVLYGLRQSTLIQWPRRLMIGVNRTRLDVHCCDSEVYPSCGVTRRNRRFRVRV
SDESNECCEDDVEAMISFLSEELVGEGRNCSRVEEKREVIKVEAFGRVKREGVERPQGFG
RQEYRRNGVRENVKLEEKYECEHCGGRKKKSQLESETRRGSKLVTGGGENFRRKEEREVR
PTRTKSSSCSSYYSLASSGDFESEAEDEEEEDVEFRRENLRNSEKRFVEQSAKGMKSRKE
VSQVHSRRKRDESSSYGKQVFEEGENSNQAVTTNQRRRRKQISQTGNRVSESTGNYEEDL
EIHEIHVNDVETNSQNQKIFGEREDERVHSIVNDSERENIGNSQQQVKERFGARYSSEER
VSEMRRRTKYSSSQEEGIHMRQNVPKPINNRQPPVEERISMQAGMRTSTERFSGSSEIYN
TNIKNTYVSQREDQIRNQEVNAGVVSGLQSEERHQDYHIEQNPSQTMQSDRTSVSVFHTS
DVVRYTEIERKSEKRLIGQESTTTVQMDSKAGKSGANSTKEGQKALELQSSQGKLSEEPS
SSQSSLTLVSGNRMQLVDLVSEEMRGSETTLIPPTSQLVSRGSGKSYGSGGAFIQESSQG
TSETGYPTAFEHPGGAGAIVNSQSAGELMGFRTQEDALGSAQRLEQSSEKFIGEFLKKAK
HEVSTSETEERRAESNQLKRRDSRRSSGGSGAKGPSDEMWVTDSAQATPQPVPTEGNAAE
GNAIVKRNGRSLWSVIADIARLRWGSRAGSPTSSAKPTGKSSPNESVSSATWFSGREHDG
SSEDNTKAERVSPQEAALPGQSEVSQTSSRSQFESSDATERKQQSGRHEGVVSSPPSTIL
EGGSASYRMPSTSDNQIVGVDEVDEGREFEFRLSETASTEVPMRLPSRNLIRSPAIKDPS
ESSPPEVPPDQNVPVGEGRRYRARVPEMDAEEKPLIFPARSLRSPVVKGPSKSLPSMVSG
SSSLRGQVEQQQPLSAKSQEETGSTSTGSPLTQRKLQRKKQVVRDSFEEWEEAYRVEADR
RTVDEIFMKEALVEAKKAADMWEVPVGAVLVHDGKIIARGYNLVEDLRDSTAHAEMICIR
EGSKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGG
EGNGSEVSEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRRKKKDKDSDPPAPTDH
HHHHHPSKLLNKMHQILPFFCL
NT seq 3849 nt   +upstreamnt  +downstreamnt
atgttcaacacatacacaaactcagttctgtggccgaggaatcaccatggttactcctct
ttgctccccgagagatctgaatctcaccgattcgccaaaccgtctccgaaatgctgctgc
gctgcttctctctcgcgctgttgctgctgctcgtactcagcaccctcctttgtgaagcct
aaggtgtcgataaaccctggattcgtgctctatggcctcagacaatccacgcttattcag
tggccgaggaggttgatgattggtgtgaataggactcgtcttgatgtgcattgttgtgat
tctgaggtttatccttcttgtggcgtcacaagaagaaatcgaaggtttagggttagggtt
tcggatgaatcgaatgagtgttgtgaagatgatgtagaggctatgatttcgtttttgagt
gaggaactggtaggtgagggtagaaactgtagtagagttgaagagaagagggaagtgata
aaggttgaagcttttggtagagttaagagggagggagtggagagacctcagggatttggt
aggcaggagtataggcgaaatggggttagagagaatgtgaagttagaggagaagtatgag
tgtgagcattgtggtgggaggaagaaaaagtctcagctggagagtgagactcggcgtggt
tctaagttggttactggtggtggggaaaattttaggaggaaggaagaaagagaagttcga
ccaacaaggacaaagagttcgagttgttcatcgtattattctcttgcttcttctggggat
ttcgagagtgaagctgaggatgaagaagaggaggatgtggagtttcgtcgcgagaacttg
agaaattcagagaagaggtttgttgaacagtcagccaaaggaatgaaatctagaaaggaa
gtctctcaggtgcattcgaggaggaagagggacgagagttcgagctatggcaagcaggta
tttgaggaaggggaaaattcaaaccaggcagtgactacgaaccagagaagaagaagaaag
cagattagtcaaactggtaacagagtgtctgagtcgacgggaaattatgaagaagatttg
gaaattcatgagatccatgttaacgatgtggagacgaattcccaaaatcaaaagatcttt
ggtgaaagggaggacgagagagtccactctattgttaatgattcggaaagagaaaatatt
gggaattctcagcagcaagtgaaggaaagatttggtgctcgttatagcagtgaggaaaga
gtgtctgaaatgcgcaggagaaccaaatatagcagtagccaggaggaaggtatacatatg
cgccaaaatgttccaaaaccgataaataatcggcaacctccggtggaggaaaggatatct
atgcaagcgggtatgaggacgagtactgagcgcttctctggaagttcagaaatctataac
acaaacatcaaaaatacttatgtctcgcaaagagaagaccagattagaaaccaagaagta
aatgctggcgtggtttctggattgcaatcagaagagagacatcaagattatcatattgaa
cagaatccctcgcaaacgatgcaatctgatagaacttcagtgtctgtatttcatactagt
gatgtagtaaggtatacagaaattgagagaaaatctgagaagaggctaattggtcaagaa
agtactacaactgtgcaaatggacagcaaagcaggaaaaagcggtgctaactcgactaaa
gaaggtcaaaaggccttggagttgcaaagttctcaaggaaagctgtctgaagagccctcc
agttcacagtcatctttgactttggtatctggaaacagaatgcagctggtagatttggtt
tcagaggagatgcgaggatctgaaacaacactgattcctcctacttctcagctagtaagc
agaggctcaggaaaaagttatggaagtggtggagctttcattcaagaaagttctcaggga
acatcagaaactggttatccaacagcctttgaacatccaggaggagcaggagctattgtt
aatagtcagtctgctggagaactgatgggatttagaacacaggaagatgctctaggttct
gcccaacggttggaacagtcatcagagaaatttattggggagtttctgaagaaggccaag
catgaagtatcaacttcagagactgaggagcgaagagctgaaagtaatcagttgaagagg
cgggactcgaggcgttcatctggtggttcaggagcaaagggaccttcagatgaaatgtgg
gttacagattctgctcaggctactccccaaccagtacccacagaaggcaatgcagcagag
ggaaacgctatcgtcaaaagaaatggtaggtccttgtggagcgtcatcgccgatattgct
cggctaaggtggggctcacgagctggaagcccgacctcgagtgcaaagcccactggaaag
agttcacccaacgagtcagttagcagtgcaacatggttttctggacgtgagcatgacgga
agcagtgaggataacacaaaagcggaaagagtttcgccacaagaagctgctctcccaggt
cagtcagaagttagtcaaacttcgtcaaggagccaatttgaatcttctgatgctacggag
cggaagcagcaatctgggaggcatgaaggtgtagtctcatcaccaccatccacaatattg
gaaggtggctctgcatcttatcgcatgccttccacatctgataatcaaattgttggcgtg
gatgaggttgatgaaggtagagaatttgagtttcggctttctgaaacagcttcgacagag
gtgccaatgagactgccaagtcgaaatctgataagatctcctgctatcaaggatccatca
gaatctagtccccccgaggtacctcccgatcaaaacgtgccggtgggagaaggaagacgc
taccgggctcgtgttcctgaaatggatgcagaagaaaagccgttgatatttccagctcgc
agcctaaggtctcctgttgtaaagggaccttcaaaatcccttcccagcatggtatctggc
agtagtagcttaagagggcaggtggaacaacaacagcctctaagcgcaaaatcccaggaa
gaaacaggttccacatcgacaggctccccattgacacaaaggaaacttcagaggaagaaa
caggttgtgagggacagttttgaagaatgggaagaagcatacagagtagaagctgatagg
cgaacagttgatgaaatattcatgaaggaagcgttagtagaagctaagaaagctgctgat
atgtgggaagtacctgttggggctgtgcttgtgcatgacgggaagattatagctcggggt
tataacctggtggaggatcttcgggattcaaccgcccatgcagaaatgatttgcattcga
gagggttccaaagcacttcgttcatggaggcttgcggatacaacactttatgtaacacta
gaaccatgtccaatgtgtgcgggagccatacttcaagcaagggtcaacactcttgtgtgg
ggtgctcccaataagcttctcggagcagatggcagctggatcaggctgttccctggaggc
gaaggaaatggatcagaagtttcggaaaagccaccgcctccagttcacccgttccatcca
aagatgacaatccggcgaggagttctggaatcagaatgtgctcagacaatgcaacagttt
ttccagctgaggagaaagaagaaagacaaggactcagatccaccggctcctaccgatcat
caccatcatcatcatccgtcgaaactccttaacaagatgcatcaaatcttacccttcttc
tgtctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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