KEGG   Brassica rapa (field mustard): 103854567
Entry
103854567         CDS       T03449                                 
Name
(RefSeq) probable pectate lyase 20
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00040  Pentose and glucuronate interconversions
brp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    103854567
Enzymes [BR:brp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     103854567
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 103854567
NCBI-ProteinID: XP_009129753
UniProt: M4DVX8
Position
A02:27743750..27748654
AA seq 417 aa
MATTQVLVLFASALLLTMLFAGVDSTRSNETWHEHAVENPDEVAAMVDMSIRNSTMRRRL
GYFSCSTGNPIDDCWRCDRKWQLRRKHLAVCAIGFGRNAIGGRDGRYYVVSDPNDDNPVN
PKPGTLRHAVIQVEPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITIQYV
TNIIIHGIHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADG
LIDAVMASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGRGLIQRMPRCR
HGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGHWQWKHWN
WRSEGDLFLNGAFFTRSGSGRGASYARASSLAAKSSSLVGVITSNAGALNCRGGRRC
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggctaccacgcaagtacttgtcctctttgcttcagcattactcctaacaatgctcttt
gctggcgtcgattccaccaggtccaatgaaacatggcatgaacatgcagttgagaatcca
gacgaagtagctgccatggtggacatgagcattcggaacagtaccatgcggagaaggtta
ggttacttctcttgctccaccggtaaccccatcgacgattgctggcgttgtgaccggaaa
tggcaactccggcgaaaacacctcgccgtctgcgcaatcggcttcggacgcaacgcaata
ggaggcagagacggacgttactacgtagtaagcgaccctaacgacgataacccggttaac
cctaaaccgggtacactccgtcacgccgtgatccaagtcgagcctctttggatcgtcttc
aaacgcgacatggtcataacactgaagcaagaactcatcatgaacagcttcaagacgata
gatggtcgtggcgtcaacgtccacatagctaacggtgcatgcatcacgatacagtacgtg
acgaacattatcatacatgggattcatattcatgactgcaaacctactggtaacgctatg
gtgagaagctctccgtcgcattatgggtggaggacgatggctgatggtgatgggatctcg
atctttgggtcgagtcatatttggattgatcacaactcgctctctagttgcgctgatggg
cttattgatgctgttatggcttccactgccattactatctctaacaattactttacgcac
cataacgaggttatgttgttggggcatagtgatacttacacaagggacaaggtgatgcag
gttactattgcttataaccattttggtagaggtcttatccagaggatgccaaggtgtagg
catggatacttccatgtagtaaacaatgactacacacattgggaaatgtatgcaattggt
ggcagtgcaagtcccaccatcaatagtcaaggaaacagatatcttgcccctagaaaccgc
tttgctaaagaggtgacaaagagagactatgcaggacactggcaatggaagcattggaac
tggagatcagaaggagatcttttcctaaacggtgctttcttcacacgttctggttcagga
cgtggagctagctacgctagagcttcaagtttggcagccaaatcgtcatcccttgttggc
gtcattacctctaatgctggcgctcttaattgcagaggtggtcgccggtgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system