KEGG   Brassica rapa (field mustard): 103856722
Entry
103856722         CDS       T03449                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit 5-like protein 1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03020  RNA polymerase
brp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103856722
  09124 Replication and repair
   03420 Nucleotide excision repair
    103856722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103856722
   03400 DNA repair and recombination proteins [BR:brp03400]
    103856722
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     103856722
  RNA polymerase III system
   RNA polymerase III
     103856722
  RNA polymerase I system
   RNA polymerase I
     103856722
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103856722
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 103856722
NCBI-ProteinID: XP_009132093
UniProt: A0A3P5ZUY7
Position
A03:5204336..5205191
AA seq 210 aa
MSEGEDEITRVFKVRRTVLQMLKDRGYNIEESDIELKREDFVQNFCKAMNKVNKEALFVT
ADKGPNPEDKIYVFYPEGPKVGVPIIKKDVVMKMRDDKVTRGIIVVPQPITGAAKNAIIE
LNKILTIEVFEEAELVTNITEHKLINKYYVLDNQAKKELLQKYTVQDTQLPRILVSDPVA
RYYGLKRGQVVKIRRTDATSLDYYTYRYAV
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtcagagggagaggatgagatcacgagggtcttcaaggtacgtcgcacggtgttgcag
atgctgaaggacagaggctacaacatagaagaatctgacatagagttgaaaagagaagac
ttcgttcaaaacttttgcaaagctatgaacaaagtcaacaaggaagctctcttcgtgaca
gccgacaagggaccaaatccagaagacaagatttacgtgttctacccggaaggtcctaag
gtgggagtcccaatcattaaaaaagacgtggtgatgaagatgagagacgataaagtcact
cgtgggatcatagttgttccacagcccattactggtgcagccaagaacgctattatagag
ctgaacaagattttaactattgaagtctttgaggaagctgagttggtgactaacatcacc
gagcataaacttattaacaagtactatgtacttgacaatcaagctaagaaggaactgctt
caaaagtacacggtgcaagacacgcagctgccacgtatccttgtctctgatcctgttgct
agatactatggactcaagagagggcaagttgttaagattagaagaactgatgctacttct
ttggactattatacctatcgatatgcagtttag

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