KEGG   Brassica rapa (field mustard): 103858366
Entry
103858366         CDS       T03449                                 
Name
(RefSeq) uncharacterized protein LOC103858366 isoform X2
  KO
K19027  zinc finger FYVE domain-containing protein 26
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103858366
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     103858366
SSDB
Motif
Pfam: TPR_2
Other DBs
NCBI-GeneID: 103858366
NCBI-ProteinID: XP_009133960
Position
A03:complement(12596100..12612427)
AA seq 2450 aa
MDNETEILSRLAANHLHLAQFEPLKATLLALRVRNPDLAHTILQTIVSTAGRFDNVLWSR
SCSSPSLLAFLSTIELLRFENPASPWGFDSETLGLRADFLLMVQVLIDGDKEGNCVRVLQ
GFLDLGVERLRFDVDASSSGGSSYMIEEEDVVALRNIVLDYSDVFDALCCNVKRQLNGGS
ERCLVEEVEHQVEAMDPREEDSNNVFALILRNVQLAQLDAIRRKLDEGDALGAADRIRYL
HLDYGVGKENYHAVLKALLSRVMEKKDEYGDSWHMVRQNLLFIYKEALSSNCGDLLEMIQ
GIQDDMLLPDSQLHLSLDNDQIPPPLECFRRYLVDSKTERNVEEKNSPLSIAVNSCLRDM
YHYARISGSHVLECVMCAALSYVKKEMLQEANDVLTLFPRLRPLVASMGWDLLPGKTAAR
RKLMRLLWSSNSQAIRLEESTLYGNNTDEKSCVENLCDTLCYRLHLASFAAYISSGKSWT
PKASFLMHGNVSSENNDAEVDPFVENLVLERLSAQSPLRVLFDVVPGVKFKEAISLISMQ
PIASTAEAWKRIQDIELMHMRYALEAIVLALGAMDEVIKDETDVSHHVVFYYLKDLTTHL
EAIKNVPRKIMMVNIVISLLHIDDIRLSSTSSLDLGDLTTEGENEIVISFTRKLLNVLRR
NLPSELIEQECQLDGNYSADGRQALEWRVSMAKHFIEDCEWRLSIMQHLLPLSERQWGLK
EVLSVLRAAPAKLLNLCMQRAKYDIGEQAVHRFALSAEDKATLELAEWVDNAFNRTLVED
VMSRTAEGASAVQDLDFSSLASQLSPLAVILLCIDAAASSAKSTTISKQLLDKSQVMLSE
IYPGGSPKVGFTYWDQVHEVAIISVLRRILKRLQEFLEQDNPQILQASFSGDTIISSATE
SHRQGQKDRALAMLHQMIEDAHKGKRQFLSGKLHNLARAIGDEKPEVDILKGDVRDIPFD
KDGVLGLGLKYKKQSPSGLASRDVDGNHVSHESEEKGKRSFGPFSNKTSTYLSQFILYIA
AIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRSSTDAAAKVAEVMSADFVHEVISA
CVPPVYPPRSGHGWACIPVIPTTTYSHSESKVLSPSKEAKPNCYVRSSATPGVPLYPLQL
DVIRHLVKISPVRAVLACVFGGSILYNGSDSVISSSLNDEFTSSPDADRLFYEFSLDQSE
RFPTLNRWIQMQTNLHRVSEFVVTPKQKPDDARIKPDERTAIKRLREHDSDSESDAEEAF
SNNIRPALTHYRARDGGSFETGASRTDPTVFLSFDWENEGPYENAVNRLIDEGKLMDALA
LSDRFLRNGASDWLLELLIKSREETPSTLGRSQGYGSQSIGSNSWQYCLRLKDKQLAATL
ALKYMDTWELDAALNVLTMCSCHLLESDPVSYEVLHRRKALQKYSHILSADDRHNSWQEV
EAECKEDPEGLALRLAGKGAVSAALEVAESAELSIDLRRELQGRQLVKLLTTDPLNGGGP
AEASRFLSSLQDSADALPVVMGAMQLLPDLRSKQLLVHFFLKRRDSNLSDLEVSRLNSWA
LGLKVLAALPLPWQQRCSSLHEHPHLIVEALLMRKQLQYASLILKEFPALRDNNVIMAYA
AKAIAVTVSPPPREPRITVSASRLRQKQRAGPAKPSFTSSLSNFQREARRAFSWGPRNAE
NRTTSKDDRKRKSSGLGAPEKAAWEAMTGIQEDQGSSYSADGQDRLPSVSIAEEWMLTGE
TTKDEAVRASHKYESTPDIVLFKALLSLCSDELVSARTAIDLCIKQMKNVLNSKKLSEAA
SVETIGRAYHATEAFVQGLSYAKSLLRKLLGASEFTNNNGDRSRDLDDMSSDAGSSSVGS
QSTDEPSEVLSLAEIWLGRAELLQSLLGSGISASLDDIADKLSSESLRDRLVSDERYSMA
VYMCKKCKIDVFPVWKAWGLALLRMERYAQARVKFKQAFQLKGEDIPDVIQEIINTIEGG
PPVDVSTVRSMYDHLAKSAPTILDDSLSADSYLNVLHMPSTFPRSERSRRSLESEKNNSV
PGSNFEDGPRSNLDSTRYSECTNYLQEHSRQNLLGFMFRHGHFKDACILFFPPSALPPPL
QSLSLGAVSSSSSPQRTDPLATEYGTIESLCEYCVGYGAISSLEEVITERLESAKHQDQA
INQYIAGALSRICAFLETNRHFNYLYKFLVLKKDYVTSGYCCIQLFMNSTTQEEAVRHLE
HAKAHFEEALTARHRGSDSKKLVTKGVRGKGVNEKLSEEALVTLSSRVKMQIDVVKSFSD
SEGAPWKLSLFGNPNDSETSRRRCEIVETLVEKNFDLAFQVIYEFKLSAVDIYAGVAASL
ADRKKGSQLTELFKNIKGTIQDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLA
CVVCGRLKRAFQIASKSGSVADVQYVAHQASHANSHAVLGLCKQWLSQNM
NT seq 7353 nt   +upstreamnt  +downstreamnt
atggataacgaaacggagattctctcccgtctcgccgcgaaccaccttcaccttgctcaa
ttcgagcccttaaaggctacgttgctcgctctcagggttcgaaaccccgacctcgcacac
acgattctccagaccatcgtctccaccgccggcagattcgataatgtcctctggtcacgc
tcttgctcttccccgtcgcttctcgccttcctctccaccatcgagcttctcagattcgaa
aaccctgcttccccttggggcttcgattcagagactctaggtttgcgtgcggatttcttg
ttgatggtccaggtcttgatcgatggtgacaaggaaggaaactgcgtacgggttttgcaa
ggttttttggatttgggtgttgagaggttgaggtttgatgttgatgcaagtagcagtgga
ggaagcagctatatgattgaagaagaggatgttgtggctttgaggaatattgtattggat
tactctgatgttttcgatgccttgtgttgtaacgttaagaggcaacttaatggtggttcc
gagaggtgtttggtggaggaagtagaacatcaagtcgaggccatggatcctcgagaagag
gatagcaacaatgtgtttgctttgatactgaggaatgttcagttagcacagttggatgct
ataagaagaaaattggatgaaggagatgcgctcggggcagctgatcgaatacgctatctt
caccttgattatggcgtggggaaagagaattatcatgccgttctaaaggctctcctttca
agagttatggaaaaaaaagatgaatatggtgactcttggcacatggtgcgccagaacttg
ctgtttatctataaggaagctctctcttctaattgcggagaccttcttgagatgattcag
ggtattcaagatgatatgctcctcccagatagccagctacatctatctctcgacaatgac
caaattccaccccctcttgagtgtttccggcgataccttgtagattcgaaaactgagaga
aatgtagaggaaaaaaattccccgctgagcatagcagttaattcttgcctcagagacatg
tatcattatgctcgtatttctggatcacatgtgcttgagtgtgtgatgtgtgctgctttg
tcttacgtgaagaaagaaatgcttcaggaggctaatgatgttctgactttgtttcccaga
cttcgcccattagtagcttccatgggctgggacctgttgcctggaaaaactgcagcccgt
agaaagctgatgcggctactttggtctagtaattcacaagcaattcggttagaagaatct
actctttatggaaacaatacagatgaaaaatcttgtgtggaaaatctctgcgatacatta
tgctatcggctgcaccttgcatctttcgctgcttatatcagttctggtaaatcttggact
ccaaaggcatctttcttgatgcatggtaatgtgtcatctgagaataatgatgcggaggtg
gatccttttgttgaaaatcttgtgttggaaaggctttctgcgcagagtccacttcgggtg
ttgtttgatgttgttccgggcgtaaagttcaaagaagctatatcactgattagtatgcaa
cctattgcttcaactgcagaagcctggaagaggatacaagatattgaattgatgcatatg
cgttatgctttggaggctattgtcttagcattaggtgcaatggacgaggtcattaaagac
gagacagatgttagtcatcatgtggtattttactatttaaaagacctcaccacccatttg
gaggcaattaaaaatgttccacgcaagattatgatggtcaacatagttatttcactctta
catattgatgatattcgtctcagttctacttctagtttggatcttggcgatcttactaca
gaaggggaaaatgaaattgttatatctttcacaagaaagctactcaatgttttacgccgc
aatcttccatcagagctgattgaacaagagtgtcaactggatggtaattacagtgctgat
ggaagacaggctttagaatggagagtatcgatggctaaacatttcattgaagattgtgaa
tggcggttatctattatgcagcatcttttgccactttctgaacgccagtggggtttaaag
gaggttttaagtgttctaagggcggcccctgcaaaacttcttaacctctgcatgcaaaga
gctaagtatgacattggagagcaggcagttcatcggtttgcgttatcagcagaggacaaa
gctactcttgaattagctgaatgggtggataatgccttcaacagaacattggtagaagat
gtgatgtctcgtactgctgaaggagcatctgcggtgcaagatttagattttagttctcta
gcttcacagttgagtccattggctgtgattctactatgcatagatgcggctgcttcttct
gccaaatctacaacaatttccaaacagttattggataagtctcaagttatgttatccgaa
atatatcctggaggatctccaaaggtggggtttacttactgggatcaggtccacgaagtt
gcaataatctctgtattgcgaaggatcttaaagcgtctgcaggaattcctggaacaggat
aaccctcaaattcttcaagccagttttagtggagataccatcatttcatcagccacggaa
tctcatcgacagggtcaaaaagatcgcgctcttgcaatgctacatcaaatgattgaggat
gctcataagggcaagcgacagttcctgagtggaaagcttcacaacctagcgagagcaatc
ggtgatgaaaaaccagaagttgacatactcaaaggggacgtaagagacataccttttgac
aaggatggagttcttggtcttgggctaaaatataagaagcaaagtccttctggtttagca
agtagagatgtggatggaaatcatgtttcacatgaaagcgaagagaagggaaagaggtca
tttggcccatttagcaacaaaacctctacttatctatctcagtttatactctatattgct
gctattggtgacatagtagacggcactgatacaacccatgatttcaactttttctctctt
gtttatgaatggcctaaagacctattgacgcgtctggtgtttgatcgaagtagcacagat
gcggctgcgaaagtcgctgaggtcatgtctgctgattttgttcatgaagtaatatctgcg
tgtgttcccccagtttatcctccacgttctggtcatggatgggcttgtattcccgtcatt
ccaacgactacatattctcactcagagagtaaagtgctgtctccttcaaaagaggctaaa
cccaattgttatgtccgttcctcagcaacacctggtgtccctctgtatcctcttcagttg
gatgtaatcagacatttggtaaaaatatccccagtacgagcagttttagcttgcgtattt
ggtgggagcatattgtacaatggcagtgattcggtcatctcgagctccttgaacgatgag
ttcacaagttctcctgatgcagacagattgttttatgaattttctctcgatcagtctgag
aggtttccaactttaaaccgatggatacaaatgcagaccaaccttcatcgagtttctgaa
tttgttgtgacacctaagcaaaaacctgacgacgcacggattaaacctgatgaaagaact
gcgatcaagagacttcgtgaacatgacagtgactcggaatcggatgcggaagaggctttt
tccaacaatattcgaccagcattgacacactaccgtgctcgtgatggtggatcctttgaa
actggagctagtagaactgatcctacggttttcctttctttcgactgggagaatgaaggg
ccatatgaaaatgctgtaaatagattaattgatgaaggaaaactaatggatgctttagca
ctttcggaccgcttcttgcggaatggggcttccgattggttacttgagctcctaatcaaa
agtagagaagaaactccttcaacattgggacgatctcaaggatatggaagtcagagcatc
gggagcaacagttggcagtattgcctgcggctaaaggataaacagctggcagcgacactg
gctcttaagtatatggatacgtgggagcttgatgcagctttaaatgttcttacaatgtgt
agttgtcatcttttagaaagtgatccagttagctatgaggtgttgcataggagaaaagct
ctgcagaagtacagccacatactttctgcagatgatcgccataatagctggcaagaggta
gaagccgaatgtaaagaagaccctgaaggcttggctttaagattggctgggaaaggagct
gtttccgcagctctggaagtggctgaaagtgcagaattatcaatagatcttagaagagaa
ttacaaggacgacagcttgtaaagcttctaaccactgatccactcaatgggggtggtcct
gcagaagcgtctcgatttctttcttcacttcaagactccgctgatgcactgccagtggtg
atgggtgcaatgcagttattacctgaccttcgttcaaaacagctcctggtccatttcttt
ctgaagcgaagagatagcaatctgtcggatctggaagtgtcccggcttaattcctgggct
ttaggtctgaaagtgttagctgcattgccacttccgtggcaacagagatgctcttcgctt
catgagcatcctcatttaatagttgaagctctgctgatgagaaaacagctacaatatgcc
tcactgatactcaaagagttcccagcattaagagataacaatgttatcatggcctatgcc
gcaaaagctattgctgttacagttagcccaccgcccagagaacctcgaataactgtgtct
gcatcacggttaaggcaaaagcaaagggcagggccagcaaaaccatccttcactagtagt
ttaagcaattttcagagagaggcccgaagagcattttcatggggaccacgtaatgctgaa
aacaggacaacgtcaaaggatgatcgtaaaagaaagagttccgggctgggggcacctgag
aaagctgcttgggaggctatgacaggtattcaagaggaccagggatcatcttattcggca
gatgggcaagatagactaccttctgtttccattgcagaagaatggatgttaactggcgaa
acaaccaaagatgaagctgtacgtgcatctcacaaatatgaaagcacccccgatattgtt
ctcttcaaggctctgctatcactttgttctgatgagctagtatcagcaagaactgcaatt
gacttatgcatcaagcaaatgaagaacgtattgaactccaagaagttatcggaggctgca
tctgttgaaacaattggccgagcatatcatgcaacagaggcatttgtgcagggtttatct
tatgcgaaatcattgctgagaaagcttctaggtgcctctgaatttaccaataacaacggt
gatagaagtagagatcttgatgatatgtcttctgatgctggcagctccagtgttggcagt
caatcaacggatgaaccatccgaagttctctcacttgcagaaatttggctggggcgtgca
gagttgctccaaagtctcctagggtctggaatttctgcttctcttgatgacattgctgat
aaattgtcatccgaatctctacgagacagattagtatctgatgaacggtatagtatggcg
gtttatatgtgcaagaaatgcaagatcgatgtttttcctgtgtggaaagcatggggtctt
gctttgttgcggatggagcgctatgcccaagctcgagtcaaattcaagcaagcctttcaa
ttaaagggagaagacattcctgatgtcattcaggagataataaatacaatagagggagga
ccgcctgtggatgtgtcaactgttcgttccatgtatgaccatttggctaaaagcgcccca
acaattttggacgattcgttatcagcagactcatacctaaatgttctgcatatgccatcg
acattccctcgttcagagagatcaaggagatccctagaatcagaaaagaataattctgta
cccggttcaaactttgaagatgggccccgaagcaacttggatagtactcgctactctgaa
tgtaccaactacttgcaggagcattctcgccaaaaccttcttggttttatgttccggcac
ggtcactttaaagatgcatgcattttattctttccaccaagtgctcttccccctcctttg
caaagtttatctctgggcgcagtcagttcgtcctcttcacctcaacgaacagatccattg
gcaaccgaatatgggaccattgaaagtttgtgtgagtattgtgtcggttatggagctata
tcatccctcgaggaagtaattacagaaagactcgaatccgcaaaacatcaagatcaagcc
ataaaccagtacatagctggagctctttcacgtatatgtgctttcttagagacaaaccgg
catttcaattacctatacaagtttctggtactcaagaaggattatgtcacctctgggtat
tgctgtattcagctttttatgaattctaccactcaagaggaagctgtaaggcatcttgag
catgcaaaggcacactttgaagaagcattgacagcacgtcacagaggttcagactcgaaa
aaacttgttacaaagggggttagaggcaaaggtgtcaatgagaagctgagtgaagaagct
ctggttacgttgtcctctcgggttaaaatgcagattgatgtggtaaagtccttcagtgat
tctgaaggagcaccctggaagctttccttgtttggaaatccaaatgattcagagacatcc
aggagaagatgtgaaatagtggagactcttgttgagaaaaactttgacttggcttttcaa
gttatatatgaatttaagctctcagctgttgatatatatgctggcgttgctgcgtcactc
gccgataggaagaaaggcagtcagttgacagaactattcaaaaacatcaagggaacgatc
caagatgatgactgggatcaggtcctgggtgctgccatcaatgtatatgccaacaagcac
aaagagcgccctgaccgtctcatagacatgttaacaagcagccatcgaaaggtgctggct
tgcgttgtatgtggccgccttaaaagggcgttccagattgcgtccaaaagcggtagcgtg
gctgatgttcaatatgtagctcatcaagcctcacatgccaattcgcacgctgtactcggt
ttgtgcaagcaatggctatcccaaaacatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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