KEGG   Brassica rapa (field mustard): 103859008
Entry
103859008         CDS       T03449                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103859008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103859008
   03016 Transfer RNA biogenesis [BR:brp03016]
    103859008
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     103859008
Messenger RNA biogenesis [BR:brp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     103859008
Transfer RNA biogenesis [BR:brp03016]
 Prokaryotic type
  tRNA degradation factors
   103859008
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1
Other DBs
NCBI-GeneID: 103859008
NCBI-ProteinID: XP_009134738
Position
A03:15602543..15617607
AA seq 905 aa
MLTSPSNALHSTPHFWPIRRSRLLLRPRNFPRFHSGGANFCSLSLLSARSGSSPRFSVRA
LAGPDASEDGLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTDGETIVYTSVCLAD
VPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMPKGFY
NETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNSKAVAGVRVGLIGGEFIVNPTVK
EMEESQLDLFLAGTDSAILTIEGYSNFLPEEMLVRAVKVGQDAVQATCTAIEALAKKYGK
PKMVDAIRLPPPELYNHVKELAGEELSKALQIKSKIARRKAITSLEEKVLTILTEKGYIV
DEAAFGTTEAQPELLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIPLLFSEVDVKLVFKE
VSSKLLRRRIVEGGKRSDGRTPDGIRPINSRCGLLPRAHGSSLFTRGETQALAVVTLGDK
QMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPGRREIGHGTLAERALETILPSD
DDFPYTIRVESTILESNGSSSMASVCGGCLALQDAGVPVKCSVAGIAMGMVWDTEEFGGD
GSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIMEKALIQAKAGRRY
ILAEMAKCSPPPTLSLSKYAPLILIMKVHPSKVYSLIGSGGKKVKSIIEESGVEAIDMQD
DGTVKIMANDIASLERAKAIISGLTMVPAVGDIYRNCEIKSMAPYGAFVEIAPGREGLCH
VSELSAEWLAKPEDAYNIGDRIDVKLIEVNEKGQLRLSVRALLPESESDKDSQKQPPTTG
DSTKSSPRKYVNPSLKDRAATGASGDELVWKKKDVSRVSSGDKPMKSSSNEEDRGSLVND
EATIS
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgctgacgagtcccagcaacgcgcttcacagcactccgcacttctggcctattcgccgg
agcaggcttcttctccgtccccggaacttccctcgtttccactccggcggagcaaacttc
tgctcgctctctctcctctccgcaagaagtgggtcgagtcctagattcagcgtcagagct
ctagctgggccagatgcttccgaggacggtttagcttttcctaaccacgtgtccgtcaaa
atccctttcggaaacagagagattttggtagagactggtctgatgggaagacaagcaagt
tctgcagttactgtgacagatggagaaactattgtctacacatcagtttgtctagctgat
gtccctagtgagccttcagattttctccccctttatgttcattatcaggagcggttctca
gctgttggccgaactagtggtggattttttaagcgagaagggagaaccaaagatcacgag
gttctgatttgtaggttgattgatagacctctacgccccactatgcccaaaggtttctac
aacgaaactcagatattatcctgggttttgagttacgacgggttacacgcacctgatgct
ttagctgttacatctgctggaatagctgtagctctttcagaagtaccaaactcaaaggcg
gttgcaggagttagagtcggtcttattgggggcgagtttatcgtcaacccaactgttaag
gagatggaagagtcacagctagatttgtttctagctggaacagattctgctattttaacg
atagagggatatagtaattttcttcctgaggaaatgctggtcagagctgttaaagttgga
caggatgcagtacaagctacatgcactgctattgaagctttagcaaagaaatatggaaag
cccaagatggttgatgctatcagattaccacctcctgagctttacaaccatgtgaaagaa
cttgctggtgaggaattgagcaaagcgctacagattaagagcaaaatagcaagaaggaaa
gcaataacttcactggaagaaaaggttttgacgatactgactgagaagggatatatcgtt
gatgaggcagcatttggaaccacagaagcacaaccggagctgttggaggatgaagatgag
gacgaggaagttgttcctgaaggtgaggtggaccaaggtgatgttcacataaggcccatc
cctaggaaacctattcctttgctattttcagaagtagatgtgaagctggtcttcaaagaa
gtatcgtcaaagctcctgaggaggcgaattgttgagggaggtaaaagaagtgatggtcga
actccggatgggatccggccaattaactctagatgtggtctgcttccaagagcacatggc
agttctcttttcacacgtggtgaaacgcaggcactggcagttgttactcttggtgataaa
cagatggcacagagaattgacaaccttgagggttctgatgaatacaagaggttttatctt
cagtacacttttcctccatcgtcagttggtgaagttggacgaattggagcaccgggtaga
agagaaataggtcatgggacactggcagaacgagcattggagactatattacctagtgat
gatgattttccttacactatacgtgttgagagtacaatacttgaaagcaatggttcttca
agcatggcatctgtttgtggcggttgcttggctttgcaagatgctggagttccagtcaaa
tgctctgttgctggcattgcaatgggaatggtttgggatacagaagaatttggcggtgat
gggtctccccttatcctttctgacatcactggagctgaagacgcatctggtgatatggac
tttaaggttgctgggaatgaggatggtgttaccgcgtttcagatggacattaaggtagga
ggaatcactttggagataatggaaaaggctctgatacaggcaaaagctgggcgtcgctat
attcttgctgaaatggcaaagtgctcgccgcctcctacgttgagtctctcaaaatacgct
ccgttgatacttattatgaaggtccatccaagcaaagtatactctcttattggttctggt
gggaagaaagtaaagagcatcattgaagaatcaggagttgaagccattgatatgcaagat
gatggaactgtcaaaattatggcaaacgatatagcgagtctggagagggcgaaagcgata
atcagtggattgacaatggttccagctgttggtgatatctataggaattgtgaaatcaaa
tcaatggctccttatggtgcctttgtagagattgcacctgggagagaaggactttgccat
gtcagtgagctaagtgctgaatggcttgccaaaccagaggatgcctataatataggagac
cgcattgatgtcaaactaatagaggtgaatgaaaaaggtcagcttcggcttagtgtacga
gctctacttccggaatcagagtcagacaaagacagccagaaacagccaccaacaactggt
gattctaccaagagttcaccaaggaagtatgtaaatccttcgttgaaggaccgtgcagct
acaggagcatctggggatgaacttgtctggaagaagaaagatgtcagtagagtatccagt
ggtgataagccaatgaaaagcagtagcaacgaagaagatagaggcagcttagtcaatgat
gaagccacaatcagctag

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