KEGG   Brassica rapa (field mustard): 103861874
Entry
103861874         CDS       T03449                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2
  KO
K12194  charged multivesicular body protein 4A/B
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03250  Viral life cycle - HIV-1
brp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103861874
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103861874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103861874
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103861874
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    103861874
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103861874
  Exosomal proteins of other body fluids (saliva and urine)
   103861874
  Exosomal proteins of colorectal cancer cells
   103861874
SSDB
Motif
Pfam: Snf7 DUF948 Ribosomal_S10 FRB_dom MACPF_D2
Other DBs
NCBI-GeneID: 103861874
NCBI-ProteinID: XP_009137831
UniProt: A0A397L0L3
Position
A03:28598583..28600691
AA seq 213 aa
MMNRLFGKPKPETNALQTLDKLNETLEMLEKKEKVLLKKAGQEVEKAKEYTRAKNKRAAI
QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNID
DVDKTMDEINEQTENMKQIQEALSTPIGAAADFDEDELEAELEELEGAELEEQLLQPTTV
LPSVPAGRQQARPIPKRTAEEEELAALQAEMAL
NT seq 642 nt   +upstreamnt  +downstreamnt
atgatgaatcggctgttcgggaaaccaaagccggagacgaatgctctccagacattagac
aaacttaacgagacacttgagatgctagagaagaaggagaaggtactcttgaagaaagct
ggacaagaggttgagaaggccaaagaatacactcgtgctaagaacaaacgcgcggctata
cagtgtttgaaaaggaagaggttatatgagcaacaagtcgaacagcttggcaatttccag
ctccgtatacatgatcagatgattatgttagaaggcgcaaaagcaacaaccgaaactgtc
gatgctttgaggagtggagcttctgcaatgaaagcaatgcagaaagctacaaatatcgat
gatgtagacaagaccatggatgagatcaatgagcagacagagaacatgaaacagatccaa
gaagcattgtctactccaatcggggcagcagctgacttcgacgaggatgagctagaagca
gaactcgaggaactagaaggtgcagagcttgaagagcagcttcttcagccgaccacagta
ttgccttcagttcctgcagggcgtcaacaagcacgtcctatacctaagaggaccgcagag
gaggaagaacttgctgcattacaggctgagatggccctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system