KEGG   Brassica rapa (field mustard): 103862716
Entry
103862716         CDS       T03449                                 
Name
(RefSeq) RAN GTPase-activating protein 1
  KO
K14319  Ran GTPase-activating protein 1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103862716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103862716
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103862716
SSDB
Motif
Pfam: WPP LRR_6 LRR_4 LRR_8 DUF562
Other DBs
NCBI-GeneID: 103862716
NCBI-ProteinID: XP_009138637
UniProt: M4FH54
Position
A04:complement(162641..165241)
AA seq 536 aa
MDNNSVTTPRVLSVKMWPPSKSTRLMLVDRITNNLTTPSIFSRKYGLLTPPQAEHDAKRI
EDLAFASANKHFQNEPDGDGTSAVQIYAKESSKLMLEAIKQGPQEEVQSTTTAGGGREDC
LFDLSGGRRAFIDESEARDLLRPLADPNNNSFTKIRFTNRSFGSEAAKVAVSVLSSIKDQ
LTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRFLDLSDNALGEKGIRAFASLFKSQR
DLEELYLMNDGISEDAARAVLELLPCTDKIKVLQFHNNMTGDEGAVAIAEIVKNCPCLED
FRCSSTRIGSEGGVALAEALASCRHLKKLDLRDNMFGVEGGIALAKTLSVLTEVYMSYLN
LEDEGAEALSEALIKSAPSLRVLELAGNDITVKSTGKLADCIAAKQCLSKLNLSENELKD
EGSILIAKALDEGHDQLAEVDMSTNMMRRAGARALAGSVLKKQAFKLLNINGNFISEEGV
DEVNDMFKDSPEKLGLLDDNDPEGEDFEDEDEEGEEEEDSELEAKLGGLKIKQEEE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggataataattcagtgacaactccaagagtgttatcagtgaagatgtggccaccgagc
aagagcacacgcctgatgctcgtggaccgcatcaccaacaacttaaccactccttccatc
ttctcccgcaagtacggtctcctgactcctccccaggctgagcacgacgccaagcgcatc
gaagacctcgctttcgcctccgccaacaagcacttccagaacgagcccgacggtgacggc
acctccgctgtccagatctacgccaaagaatcaagcaaactcatgctcgaagccatcaag
caaggtccccaggaggaggttcaatccaccacgactgcgggtggggggagggaggattgc
ttgtttgatttatccggtgggcgtagagccttcattgacgaatccgaggcccgcgacctt
ttgcgccctttggctgatcctaacaacaactctttcaccaagatccgtttcaccaacagg
agcttcggctctgaagctgctaaagttgctgttagcgtgctgtcttctatcaaagatcag
ctcactgaagttgatctctcggactttgtcgcggggagaccagaggccgaagctcttgaa
gtcatgaacatgttttcgtctgctttggaaggttccaagcttaggtttttggatctttcg
gacaatgccttgggtgagaaagggatccgagcgtttgcttctctcttcaagtctcagcgt
gacttggaggagctttatctgatgaatgacggcatctccgaggatgctgcgagagcggtt
ctcgagctgcttccttgtactgacaaaatcaaggttcttcagtttcataacaacatgact
ggagacgaaggagcggttgccattgcggagattgtgaagaattgtccgtgtttggaggat
ttcaggtgttcttctacaaggattggttctgagggaggcgttgcgcttgctgaagcgctt
gcgtcttgtagacacttgaagaagcttgatcttcgtgacaacatgtttggagtcgaaggt
gggattgctctggccaagactttatcagtgttgactgaggtctatatgagttaccttaac
ttggaggatgagggagcagaggcactctctgaagctttaatcaagtctgctccttctctt
cgagttcttgaattggctgggaatgatattactgtgaaatccactgggaagttagcagat
tgcatcgccgcaaaacagtgtctttcgaagctgaatttatctgagaatgaactcaaagac
gaagggagtatcttaatagcaaaggcgcttgatgaaggtcatgaccagttggctgaagtt
gacatgagcaccaacatgatgagaagagctggggcaagagccttggcaggaagtgttttg
aagaaacaggctttcaagcttctgaacattaatggaaacttcatatctgaggaaggtgtg
gacgaggtgaatgacatgtttaaggactccccggagaagcttggtcttttggatgataat
gaccctgaaggtgaagattttgaagatgaagatgaggaaggcgaagaagaagaagacagt
gaactggaagcaaagctcggaggtctgaaaatcaagcaagaggaggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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