KEGG   Brassica rapa (field mustard): 103863984
Entry
103863984         CDS       T03449                                 
Name
(RefSeq) mRNA-decapping enzyme subunit 2
  KO
K12613  mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103863984
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103863984
Enzymes [BR:brp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.62  5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
     103863984
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103863984
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103863984
SSDB
Motif
Pfam: DCP2 NUDIX
Other DBs
NCBI-GeneID: 103863984
NCBI-ProteinID: XP_009139997
UniProt: M4E9X5
Position
A04:complement(10153529..10155743)
AA seq 289 aa
MSSLPSKKSLDDLYTRFVVNGPEEEKQSMNRLMFLVESAHWYYEDNVVENDKTLKSLSFG
EFTRLLFNNSDVLRPHVANMDKIFRDFGYYKSRIPVAGAIILDETCERCLLVKGWKKSSN
WSFPRGKKNTNEEDDVCAIREVLEETGFDVSKLLKKEEYIEITFQGKKRVRLYVVVGVRD
DTAFAPLTKKEISQISWFRLDGLESGFAGLKLFEVAPFLASLKSWISKHMSPLSIDKHLK
PPLCVWTTTRKTRTKITVTSTERRCNVKPWKQSLKVNKSAILQALGICS
NT seq 870 nt   +upstreamnt  +downstreamnt
atgtcgagcctcccgtcgaagaaaagtcttgacgatctctacactcgatttgttgtgaac
ggccccgaggaagaaaaacagtctatgaatcgactaatgtttcttgtagagagtgctcac
tggtactacgaagataacgttgtcgaaaacgacaaaaccctaaagtcgctgtcctttgga
gagtttactcgtctcttattcaacaactccgatgtgttgagacctcacgttgcaaacatg
gataagatattcagagactttggttattacaagtctcgaatcccggtcgctggtgcgatt
atattggacgagacatgcgagcgttgcttgctggtcaagggatggaaaaaatcatcgaac
tggagctttccacgagggaagaagaatacgaacgaagaagatgatgtttgtgctatacga
gaggtcctcgaggagacagggtttgatgtctcgaagctgcttaagaaagaagaatacatc
gagattacattccaaggaaagaagagagtgaggctttacgttgtggtcggtgtgagagat
gatacagcttttgcaccgctaacgaagaaggagattagtcaaatctcatggtttcggctt
gatgggcttgaaagtggattcgctggtctcaagttgtttgaggttgcaccttttctagca
tccttgaagtcgtggatatcaaagcacatgtctcctctgagcattgacaagcaccttaaa
ccaccactctgcgtgtggactacaacaaggaagacaaggacaaaaataacagtaacatca
acggaaagaagatgcaatgtaaaaccttggaaacagtctctaaaggtcaacaagtcagca
atcttgcaggccttgggaatttgttcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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