KEGG   Brassica rapa (field mustard): 103865787
Entry
103865787         CDS       T03449                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00040  Pentose and glucuronate interconversions
brp01100  Metabolic pathways
Module
brp_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    103865787
Enzymes [BR:brp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     103865787
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 103865787
NCBI-ProteinID: XP_009141884
Position
A04:19900709..19903260
AA seq 412 aa
MAWIASAFKALCLSFLFVSVACRSTNGSKVFNVRRYGANPDGKTDNVNTFTSIWKSACAR
SGSSKIYVPNGTFYLGGAVVFEGPCINQIEFIIDGTLLAPSNPGDIKNKTWINFRYINNL
LISGAGTLDGQGKESWKLNDCSKNPSCPILAMYFNRFDYSNMGFAFVNNSRINGITSLNS
KMGHFDFFSVHQFNITGVTIKAPGDSPNTDGLKFGFCSNIHISDTHIGTGDDCIAILSGV
TDMDISNVKCGPGHGISVGSLGKGKDDKDVNGLTVRDTVFNGTSDGIRIKTWESSISQIV
VSHLVYENIQMINVGNPINIDQKYCPYPPCKKKGESHVQIQDLKLTNIYGTSKNKVAVKL
KCSKSFPCKNVELVDINLENKGSKGPSTAVCENVHGSAHGKMVPEHCLNGPW
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggcttggattgcttctgcgtttaaggctttgtgtttgtctttcttgttcgtcagcgtt
gcatgtcgttcgaccaacggatcgaaggttttcaatgtccgacgctatggtgccaatccc
gacggcaaaactgataacgtcaacacgttcacaagtatatggaaaagcgcatgcgcaagg
agtggaagtagtaaaatctacgtaccaaatggaacattctatctcggtggtgcggtggtg
ttcgaggggccatgcataaatcagattgaattcattatagatggaactttattggctcct
tcaaaccccggagacattaaaaataaaacgtggatcaacttcaggtacattaacaatctc
ctaatctctggtgctggtacactagacggccaagggaaagagtcatggaaactcaatgac
tgctccaaaaaccccagctgtcctatactagctatgtattttaatagatttgattattct
aacatgggatttgcatttgtgaataactcgagaatcaacgggataacatcactcaacagc
aaaatgggacacttcgacttcttctccgtccatcagttcaacattaccggagtcactata
aaagctcctggcgacagccctaacaccgacgggcttaagttcgggttctgtagtaacatt
cacatctccgacacacacatcggaacgggagacgactgtatcgccattctttccggagtt
actgacatggatatctctaatgtcaagtgtggtcccggacatgggatcagtgttggaagc
ttagggaagggcaaagacgataaggatgttaatggcctaaccgtaagagacacggttttt
aacggcacaagtgatggtattcggatcaagacttgggaatcttcaatttctcagatcgtt
gtttctcacctcgtgtacgagaatattcagatgattaatgttggaaacccgatcaacatc
gatcagaagtattgtccttatccaccctgtaaaaagaagggagagtcccacgtacagatc
caagaccttaagttaacgaacatatatggaacttcgaagaacaaagtggcggtgaaacta
aaatgtagcaagagctttccgtgcaagaacgttgagctagttgacataaacctagagaac
aagggatccaagggtccttccactgcggtatgtgagaatgttcacggttctgcacatggc
aagatggttcctgagcattgtctgaacggtccatggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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