KEGG   Brassica rapa (field mustard): 103866108
Entry
103866108         CDS       T03449                                 
Name
(RefSeq) probable polygalacturonase At2g43860
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00040  Pentose and glucuronate interconversions
brp01100  Metabolic pathways
Module
brp_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    103866108
Enzymes [BR:brp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     103866108
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 NosD
Other DBs
NCBI-GeneID: 103866108
NCBI-ProteinID: XP_033145457
Position
A04:21353070..21355097
AA seq 410 aa
MIHKTSGLLLLPLTLIFLDFILISSLANPTPITSLNVLTYGAKPDGSKDSTKAFLAAWEA
ACASPNPTTIIVPKGRFLVGNLVFQGNKCTNAPISFRIAGSIIAPEDFRVIASSLQWIMF
DGVTNVSIYGGVLDAQGSSLWKCKNSGGKKCPTGAKTLLFTDSNNISIYGLTSINSQKFH
IVIDQSNNVKIDGVKVSADADSPNTDGIHIENSHSVNITNSRIGTGDDCISIGPGSTHVS
IQGIQCGPGHGISIGSLGRSEDEQGVENVIVSNVDFMSTDNGVRIKTWGKDSKSFVRNIV
FQHIKMKMVKNPIIINQHYCLDKPCPKKESGVEISNVRYEDIQGTSNTEVAVMLDCSKDK
PCTDIVMGNVNLVLQMVNGSAQASCNNANGLANDVVVPFTPCLKRDLLLT
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgattcacaaaacatcaggtcttcttcttcttcctctgactctcatctttcttgatttc
atcctaatctcatcattagccaacccgaccccaatcacatccctcaatgtcttaacctac
ggagctaaaccagatggctcaaaagactcaaccaaagccttcttagccgcgtgggaagcc
gcatgtgcctctccgaatcccacaactattattgtaccaaaaggacggttcttggtcgga
aaccttgtattccaaggcaacaaatgtacgaatgctccaatatcttttcgtatagccggc
tcaattattgcaccggaagattttagagttatcgcaagctcactacaatggatcatgttc
gatggagtcactaacgtttcaatctacggtggtgtacttgacgcacaaggctctagtttg
tggaaatgcaagaacagtggtggcaaaaaatgccctactggcgctaagactttgttattt
actgattcgaataacatcagtatctacggtttaacgtcgatcaatagccagaagttccat
atagttatcgaccagagcaataacgttaagattgacggcgttaaagtttctgctgatgcg
gatagccctaacaccgatgggattcacatcgagaactctcactcagtgaatatcactaac
tcaagaattggaaccggggacgattgcatctccatcggtccaggatccactcatgtttct
atacaaggcattcaatgcggtccaggccatggcatcagtatcgggagtcttgggagatca
gaggacgagcaaggagttgagaacgtgatcgtgagtaacgtggatttcatgtcaacggat
aacggagttaggatcaagacatggggaaaagatagcaaaagtttcgtacgaaacattgtt
ttccaacatattaaaatgaagatggtcaagaacccgattatcataaaccaacactattgt
cttgacaaaccttgccctaaaaaggaatctggagttgaaatatcaaatgtgagatatgaa
gatatacaagggacatcgaatacggaagtggcggttatgttggattgtagtaaggataaa
ccatgtaccgatattgtaatgggtaatgtgaatctcgtcttgcaaatggttaatgggtcg
gctcaggcttcttgcaacaatgcaaatggattagctaatgatgtcgttgtcccgttcact
ccttgtctaaagagagacttgcttttgacatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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