KEGG   Brassica rapa (field mustard): 103867606
Entry
103867606         CDS       T03449                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
  KO
K11844  ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.4.19.12]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103867606
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:brp01002]
    103867606
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103867606
Enzymes [BR:brp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103867606
Peptidases and inhibitors [BR:brp01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103867606
Ubiquitin system [BR:brp04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103867606
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP
Other DBs
NCBI-GeneID: 103867606
NCBI-ProteinID: XP_009143930
UniProt: M4CMW7
Position
A05:6976900..6988158
AA seq 1166 aa
MGKQLKKGRAPPGGNQFSKKVAKQSAETVMEQRCCVHFDKCVDLNKLLKKMKACKEIKCG
ECKEGVDMKRRSEGKVSSFSCDAAKRAVWLCLECGRYCCGGVGLPTEPQSHVMHHIKMTC
HRLVIQCENTRLRWCFACQSLLPFEKEVNGERKDLLLEAVKLIKERSSKICSGEAEAEED
SRSSSSISGEIRGSGYGVRGLVNLGNTCFFNSVLQNLLSLDRLRDRLFKEDQSCGGPLVS
SLKKLFTEATSEAGLFNSVINPWDFFGSLCSKAPQFRGYQQHDSHELLRCLLDGLSMEES
SLRKKHDADESEKPTLVDYVFGGEVSSTISCLECGHSSKVYEPFLDLSLPVPSKKQTLSQ
EERSKLSPPTKVLENVADSKDSSEPVSTMTFDNNQVPEIIVTQKDMEEVGSFLCESFGIE
VSHNETDLVSQGGVSDNEDRSAKRKDKEPIMQCSKDTALNGIDEAQVWGYPDLEQSSSSA
NPLADEEVPLLVVDSQVMNMPYKDDKAVAEGKGAKQACSIVRQTFESSTETLMHDNDRSA
KPDKEAMQCSKDTASSEISAEIDEAQVWGYPDIGHSFSFAKPCADEEVPLLVADSQGGVS
VNDEGSAKQKDKEAIMQCSKDTASSGIDEAQVWGYPANPLANEELPLLVVDSQVMNMPYK
DDISYDDKTAAEGKGEKQACSIVRQTFESSTETLMHDNDGSAKPDKEDAQAMQCSKETAS
SEISEEIDIGHSSSSAKPCADEEVPLLVADSQVLYMPYKDDKTVAEDKGETSSSYVSGHH
DQTVDYVDFSWFFKEPDVSCDDKTVRECEDEVSSSLVSSHHGKTVDYAVLNEPDVSCNDK
TVKEREGEVTSSLVSSHHGKTVDYAVLNEPDVSCGDKTVKECEGEAPSSFVSSHHGQKID
NADYYWFFEEPEVSKGPAFGPPTKAEVSEAGFMGVSCNSDAEVVLDDSDSPVSVDTCLAM
FTKPEILSEDNAWHCENCSKNLKLQRLREKRERFGYGWVYDNGFDECRDDIFNQSFIDFN
NWDTIYDDEAVDSEEVVVRRAAIKRVQVNKAPPVLTIHLKRFSQDAQGRLSKLRGHVAFS
EFIDLGLYMDMDSRQDEEDQPVYMLAGLVEHSGTMRRGHYVAYIRGDDKERRDSSVWYRA
SDSFVRQVSFEEVLPSEAYILFYQRI
NT seq 3501 nt   +upstreamnt  +downstreamnt
atggggaagcagttaaagaaaggtcgagctcctccaggtgggaatcagttctccaagaag
gtagctaagcaaagcgcggagacagtgatggaacaaagatgttgtgtgcattttgataaa
tgcgttgatttgaataagctgttgaaaaagatgaaagcttgtaaggaaatcaagtgtgga
gaatgcaaggaaggagtggacatgaagagaagaagtgaagggaaagttagtagcttttct
tgtgatgctgctaagagagctgtttggctttgcttggagtgtggccgttattgctgtgga
ggtgttggtttgccaactgaacctcagagtcatgtcatgcatcacatcaagatgacgtgt
caccgtcttgtgattcagtgtgaaaacactcggttgagatggtgtttcgcttgccagtca
ctgctcccttttgagaaggaagtgaatggtgagaggaaagatttgttattggaagctgtg
aagctgattaaagaacgttcgtcaaagatttgctctggtgaagctgaggctgaagaagat
tcacgttcaagtagtagtatctctggtgagatcagaggttctggttatggtgtaagaggt
ttagttaaccttgggaacacatgtttctttaactctgtgttgcagaaccttctttctttg
gatcggttacgtgaccgcttgtttaaagaggatcagtcttgtggcgggcctcttgtttcc
tccctgaagaagctgttcacagaagcaacatcagaagcaggcttgttcaatagtgtgata
aacccatgggacttttttggttctttatgttctaaggctcctcagtttagagggtatcag
cagcatgacagtcacgagctgctaaggtgtctgttggatggtttgagcatggaagaatcg
agcttgagaaagaagcatgatgctgatgagagtgagaaacctactctggtagattatgtg
ttcggtggtgaagtttcaagcaccatctcttgtttggaatgtggacattcctcaaaggtt
tatgaaccctttttggatctctctttacctgttccctccaagaaacaaacactctctcag
gaagagagaagtaaactttcaccaccaacaaaggtccttgagaatgtggcagacagcaaa
gattcatcagaacctgtgtcaactatgacctttgacaataatcaggtccctgaaattatt
gtaacacaaaaggatatggaagaagttggtagttttttgtgtgaatcttttggaatagaa
gtctctcacaatgagaccgatctggtttctcaaggtggtgttagtgataatgaagacaga
agtgcaaaacgaaaagataaagagcctattatgcagtgtagtaaagacacagccttaaat
gggattgatgaggctcaagtatggggctatcctgatttagagcagagttcttcatctgca
aatcccttggctgatgaagaggttcctttgctggttgtagattctcaagttatgaatatg
ccttataaagatgataaagcagttgcagaaggtaagggtgcgaagcaggcttgttcaata
gttagacagacttttgaaagtagcacagaaacgctgatgcatgataatgacagaagtgca
aaaccagataaagaggctatgcagtgtagtaaagacacagcttcaagtgagatttcagca
gagattgatgaggctcaagtatggggctatcctgatatagggcatagcttttcatttgca
aagccatgcgctgatgaagaggttcctttgttggtagcagactctcaaggtggtgttagt
gtaaatgacgagggaagtgcaaaacaaaaagataaagaggctattatgcagtgtagtaaa
gacacagcttcaagtgggattgatgaggctcaagtatggggttatcctgcaaatcccttg
gctaatgaagagcttcctttgctggttgtagattctcaagttatgaatatgccttataaa
gatgacatatcctatgatgataaaacagctgcagaaggcaagggtgagaagcaggcttgt
tcaatagttagacagacttttgaaagtagcacagaaacgctgatgcatgataatgatgga
agtgcgaaaccagataaagaggatgcacaagctatgcagtgcagtaaagagacagcttca
agtgagatttcagaagagattgatatagggcatagctcttcatctgcaaagccatgcgct
gatgaagaggttcctttgctggtagcagactctcaagttctgtatatgccttataaagat
gataaaacagttgcagaagacaagggtgagacttcctcgtcgtatgtgagcggccaccat
gaccaaaccgtagattatgttgactttagctggttttttaaagagcctgacgtctcttgt
gatgataaaacagttagggagtgtgaggatgaagtttcctcttcactagtgagcagccac
catggaaaaaccgttgattatgctgtccttaacgagcctgacgtctcctgtaatgataaa
acagttaaggaacgtgagggtgaagttacctcgtcactagtgagcagccaccatggaaaa
accgttgattatgctgtccttaacgagcctgacgtctcctgtggtgataaaacagtcaag
gaatgtgaaggtgaagctccctcgtcatttgtgagcagccaccatggacaaaagatagat
aatgctgactattactggtttttcgaagagcctgaggtatctaaaggaccagcttttgga
ccaccaactaaagctgaagtttctgaagctggtttcatgggtgtcagctgcaactctgat
gctgaagtagtgcttgatgattcggattcacctgtctctgtagacacctgtttggctatg
ttcaccaagcctgagattttgtcagaagacaatgcttggcattgtgagaactgttcgaaa
aacctaaaactccaacggttgagagaaaagagagaaagatttggctatggatgggtgtat
gataatggttttgatgagtgcagagatgatatattcaaccaatcctttatagatttcaat
aactgggataccatatatgatgatgaggcagtagattcagaggaagtggttgtaagaaga
gctgcaattaaaagggtacaagtaaacaaggcaccacctgtcttgaccattcatctcaaa
aggtttagccaagacgcccaaggcaggctaagcaagttacgtggccatgttgctttcagt
gagtttatcgatcttggcctatatatggatatggactctaggcaggacgaagaagaccag
ccggtttacatgttggcagggttagtggagcattccgggacaatgaggagaggtcactat
gttgcgtacattagaggagacgataaggagaggagagactcatccgtttggtatcgtgca
agcgattcttttgtaagacaggtttcttttgaagaagttcttccttctgaggcgtatatc
ttattctaccaacgtatctga

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