KEGG   Brassica rapa (field mustard): 103870528
Entry
103870528         CDS       T03449                                 
Name
(RefSeq) probable DNA helicase MCM8 isoform X2
  KO
K10737  DNA helicase MCM8 [EC:5.6.2.4]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103870528
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103870528
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    103870528
SSDB
Motif
Pfam: MCM MCM_OB MCM_lid AAA_5 Mg_chelatase AAA_3 Sigma54_activat AAA_16 AAA cobW AAA_29
Other DBs
NCBI-GeneID: 103870528
NCBI-ProteinID: XP_009146910
Position
A05:25589513..25594489
AA seq 788 aa
MTSRRRGSIGVDSTDIAKILAVYFRDNENSCIDEEKLMLTAELIRIFSSPSGRDLVSQQV
SEDGGGSFSLPLDLQQFKKLCDIENFFINLEDNPKGVLPCMNAAVHKVLLSQWETNGFDD
VMKINIRLHNYPESSISLKNLRAAYIGKLVTVHGTVVKVSTVKPLVTQMAFDCAKCKTSI
TRDFTDGKFSPPQNCDTHGCKSKMFIPLRSSAQTIDFQKIRVQELQKPEDHEEGRVPRTV
ECELMEDLVDTCIPGDVVTVTGIIGVINNYMDIGGGKSKSKNQGFYYLFIEAVSVKNSKK
QSAFENSEDSGSGVQSADVGDLYSFSQRDLEFIVKFNEEYGSDTFRRILHSVCPSIYGHE
IVKAGITLSLFGGVRKHSMDRNKVPVRGDIHVIIVGDPGLGKSQLLQAASAISPRGIYVC
GNATTKAGLTVAVVKDSMTNDYAFEAGAMVLADGGVCCIDEFDKMTNEHQALLEAMEQQC
VSVAKAGLVASLSARTSVIAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPD
ELLDKQVSEHIMSLHSGGGEALPALKKFKTASGSANIHAKEGSLLSRLRLDPKKDDDFTP
IPGQLLRKYVAYARTFVNPKMSKAAGEIIQKFYLKLRDHNTSADSTPITARQLESLVRLA
QARARVDLREDITVQDAMDVVEIMKESLYDKFVDEHGVVDFGRSGGMSQQKEARRFLSAL
DKQSELQQKDCYSVSELYSLADRIGLRVPDIDTFLENLNTAGYLLKKGPKTYQVLSSSYS
RSQSSRSR
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgacgtcgagacgccgtggatcgatcggcgttgattctaccgatatcgcgaagatatta
gctgtgtatttcagagacaacgagaactcgtgcatcgacgaggagaagttgatgctcacg
gcggagcttatccggatattctcttcgccgagtggtagagacttagtttcccagcaggtg
agtgaagatggtggtggttccttctctttgccgcttgatcttcaacaattcaagaagtta
tgcgatatcgagaattttttcattaatttggaggataatcccaaaggagtcctcccatgt
atgaatgctgcagttcacaaggttttactaagtcaatgggagactaatggctttgatgat
gttatgaagatcaatattcgtctgcataattatcctgaatcttcaatctctctgaaaaac
ctcagagcagcatatattggtaagcttgtaacagttcatgggaccgttgttaaagttagt
actgtgaagcctcttgtgacacagatggcttttgactgtgcaaagtgtaaaactagcata
acccgggattttactgacggaaagttttcacctccgcaaaattgtgacacccatggatgt
aagtccaagatgtttattccactccgatcctccgctcagaccattgattttcagaaaatc
agggtacaggagttgcaaaagcctgaagaccatgaagaaggaagggtaccccgaactgta
gaatgtgagctgatggaagaccttgtggacacatgtatccctggtgatgtggtgactgtt
acagggattataggtgtaattaacaattacatggatattgggggagggaaatctaagtcc
aagaatcaaggattctactatttgtttatagaggcagtttcagttaaaaactctaagaag
cagtctgcatttgagaactcagaagactccggtagtggtgtccagtctgcagatgttggt
gatttatattcattctcacagagagacttggaatttattgttaagttcaacgaagaatat
ggttctgatacattccgtcgtatacttcattctgtttgtccatctatttatggccatgaa
attgtcaaagctggaataacactgtccctgtttggaggtgtaaggaagcattcgatggat
cggaacaaagttccagtcagaggagatattcatgtcattattgttggtgaccctggattg
ggaaaaagtcagctcttgcaagcagcatcggccatctcccctcgtggcatctatgtatgt
ggtaatgcgacgactaaagcagggctcaccgttgctgtagtgaaagattctatgacaaat
gactatgcgtttgaggctggtgccatggtacttgcagatggcggggtttgctgcattgac
gagttcgataaaatgaccaacgagcatcaggctttgctagaagcaatggaacaacaatgt
gtctctgttgcaaaggctgggcttgtggccagtctatcagctcggacttctgttatagca
gcagcaaatcctgttggtggccactacaaccgtgcaaaaactgtaaacgagaacttaaag
atgagtgctgcgcttctctcgcggtttgatttggttttcatattacttgacaaacctgat
gagctactcgacaagcaagtctcagagcatattatgtcgcttcattctggaggtggagaa
gcattacctgcattaaagaagtttaagacagcatcaggatctgcaaatatacatgccaaa
gagggttctctactctcaagactgcggttagaccctaagaaagatgatgacttcactccc
attcctggccaactgcttaggaaatatgttgcttatgcaaggactttcgtcaaccctaag
atgtcaaaggcagctggagagataattcaaaaattttacttgaagctgagagaccataac
acatccgctgactcaacaccaataacagcaagacaactggaaagtttggtcaggcttgcc
caagcgagagctcgggttgacttaagggaagatataacagtccaggacgcaatggatgtg
gttgaaataatgaaagaatctttgtatgataagttcgtagatgaacatggggttgtggat
tttggtcggagtggaggaatgagtcaacaaaaggaggcgagacgcttcttaagtgctctt
gataagcaatcagagttgcagcaaaaagattgttactctgtttcggagctgtatagttta
gctgataggatcgggctacgagttccagacattgatacattcctagagaacctgaacact
gccggctacttgctcaagaagggaccaaaaacttaccaggtcctctcctcatcttattct
cggagtcagtcatccaggtcaagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system