KEGG   Brassica rapa (field mustard): 103873229
Entry
103873229         CDS       T03449                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103873229
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103873229
Spliceosome [BR:brp03041]
 Complex C
  Other components
   Complex C specific factors
    103873229
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC SecA_DEAD UTP25
Other DBs
NCBI-GeneID: 103873229
NCBI-ProteinID: XP_009149901
UniProt: M4DNP6
Position
A06:11102500..11105056
AA seq 588 aa
MEVDDDYVEYVPVAKRRAMEEQKILQRKGKVLEVEEEASEKEKLAESKPSLLVQATQLKR
DVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLSTGWKPPLRIRKMSSK
QMDLIRKQWHIIVSGEDIPPPIKSFEDMKFEKPILDTLREKGIVQPTPIQVQGLPVILSG
RDMIGIAFTGSGKTMVFVLPMIMIALQEEMMMPIGPGEGPIGLIVCPSRELARQTYEVVE
QFVAPLVKAGFAPLRSLLCIGGVDMRSQLDVVKRGVHIVVATPGRLKDLLAKKKMNLDAC
RYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNV
GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVE
AVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH
RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELKDPMEEAENIAN
ASGVKGCAYCGGLGHRIRDCPKLEQQKSVAISNSRKDYFGSGGYRGEI
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggaagtagacgatgattacgtggagtatgttccagttgcgaagcgtagagccatggaa
gagcaaaagattcttcaacggaagggcaaagtgttggaggtggaggaagaagcttcggag
aaggagaagctcgccgaatccaaacctagcttgctcgtccaagcaactcagctcaagcgt
gacgtacccgaagtcagtgccaccgagcaaatcatcctgcaagagaaggagatgatggag
cacttatctgataagaagacgctcatgtctgttcgtgagttagccaaaggtatcacttac
acagagcctctctcaacaggttggaaacctcctttgcgtattaggaagatgtctagcaag
cagatggatttgattaggaagcaatggcatatcattgttagcggtgaagacattcctcct
cccatcaagagcttcgaggatatgaagttcgagaaacctattttggatactctcagggag
aaagggatagtgcagccgactcctattcaagttcagggtcttcctgtgattttgtctggg
agagatatgattgggattgccttcactggttccgggaagactatggttttcgtgcttcct
atgattatgattgctctccaggaggagatgatgatgcctattggtcctggagaaggcccc
attggccttattgtttgcccttctagagagcttgctaggcagacttacgaagttgttgaa
cagtttgtggctcctttggtcaaggctggtttcgcgcctttgaggtctttgctatgcatt
ggaggtgtcgatatgaggtcccagttggatgttgtcaagagaggtgttcatattgttgtt
gctacccctgggaggttgaaggatttgctcgccaagaaaaagatgaacttagatgcctgc
aggtacctgacgctggatgaggcagataggttggttgatttgggtttcgaagatgacatt
agggaagtctttgaccatttcaagtctcagcgtcaaacacttctcttctctgccacaatg
cctaccaaaattcaaatatttgccagaagtgctctggtgaaacctgtgacagttaacgta
ggaagagccggagctgcgaatctcgatgtcatccaggaggttgaatacgtcaaacaagaa
gcaaagattgtttacctcctcgagtgcctgcagaagacctctccgccggttttaattttc
tgtgagaacaaggctgatgttgatgatatccacgagtacttgttactgaaaggagtggaa
gctgttgctatacacgggggaaaagatcaggaggacagagagtacgccatctcttccttc
aaagctgggaagaaagacgtcttggtcgcgactgacgttgcttcaaaagggttagacttc
cctgatattcagcacgtcataaactacgacatgcctgcggagattgagaactatgtgcac
aggataggaagaacaggtcggtgtgggaaaacagggatagcaactacgtttataaacaag
aaccaaagcgagaccacgctgcttgatctgaaacacttgctgcaagaagctaaacagagg
attccacctgtccttgctgagctgaaggatccgatggaggaagcagagaatattgctaat
gcaagtggtgtcaagggttgtgcttactgtgggggtctgggacatcgtattagagactgt
ccgaaactggagcagcagaagagtgtggccatatctaactctaggaaagactacttcggc
tctggtggatacagaggagagatataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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