KEGG   Bradyrhizobium amphicarpaeae: CIT40_05745
Entry
CIT40_05745       CDS       T05700                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
brq  Bradyrhizobium amphicarpaeae
Pathway
brq03030  DNA replication
brq03430  Mismatch repair
brq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CIT40_05745
   03430 Mismatch repair
    CIT40_05745
   03440 Homologous recombination
    CIT40_05745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brq03032]
    CIT40_05745
   03400 DNA repair and recombination proteins [BR:brq03400]
    CIT40_05745
Enzymes [BR:brq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CIT40_05745
DNA replication proteins [BR:brq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CIT40_05745
DNA repair and recombination proteins [BR:brq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CIT40_05745
SSDB
Motif
Pfam: RNase_T FAN1_HTH VRR_NUC Rv2179c-like
Other DBs
NCBI-ProteinID: AWL99579
UniProt: A0A2U8PP86
Position
complement(1186131..1188290)
AA seq 719 aa
MAKPPILPAYYYLDHFVEMLAFVQKTYGSVLGEEHRAFIARFEGLSRDARCLLIRMVNRR
GAIFNRSLFSYPEIADVGRAAAELMAASYARALGEGDYAAFVACLPRDVLVTGAQAAGRG
DVRKSWSKPKFVDYYLEQIPFAVAAQHCGAHKFIALDGTRPIEFLLYLYFGKTETDLKSF
ALRDLGVLRTNQETAFSARFSDGDEALASFHYSQILDRLDVKSDAVCRQAAVDILAGPAC
GSEYAEELRSRAAHQAGVFFEKAGDHDFARQLYRAGASADCNERLVRLLYNDGDRPGAEA
LLQRMIDQPLSDGEHLFATDFYARKFGGRRTGLYTELLRSGRTITVDDTHRGNPEAGVAG
VLRRDGATVFHTENMLWHTLFGLLFWDELFESTQLPSGFDWVPHCLRDRSFSRLFAASIA
KKIGAIEAGTALPMILRTVAARWGRPNGIFAWDHFQIEALRALLQGANPPGLARIIRAMC
EDFRGMRDGFPDLMVVRDGRVSFMEIKAAGDVIRRNQLTRLHQLGAAGITAEIGRVDYRF
DPDQDYVVVDIETTGSFSNGDRITEIGAVKVRNHQVVDEWHSLINPQRPIPWKITQLTGI
TNEMVRDAPVFAEVSESFLDFMADGIFVAHNVNFDYGFIAYEYKRLERRFRFPKLCTCAG
MRRRYPGHESYGLGKLCDIYGIALPNHHRALCDARASAHLLNLINHKRDDDLTADVEAA
NT seq 2160 nt   +upstreamnt  +downstreamnt
ttggccaagccaccgatcctgcccgcctactactacctcgatcatttcgtcgagatgctg
gcgttcgttcagaagacctatggttcggtcctcggcgaggaacatcgcgcctttatcgcg
cgcttcgagggcctatcgcgggatgcgcggtgcctgctgatccggatggtcaatcggcgc
ggcgcgatcttcaaccggtctctgttcagctatcccgagattgccgacgtcggacgcgcg
gcggccgaactgatggcggccagttacgcccgcgcgctcggcgaaggcgactatgctgcg
ttcgtggcctgtcttccaagagacgtactggtcacgggtgcacaggccgctggacggggc
gatgtccggaaatcctggtcgaagccgaagttcgtcgactattatctcgaacagatccct
ttcgccgtcgccgcgcagcactgcggcgcgcacaagttcatcgcgctcgacggcacgagg
ccgatcgagttcctcctctatctctatttcggcaagaccgagaccgacctgaagagtttt
gcgttgcgcgatttgggcgttctgcgcaccaaccaggagacggccttcagcgcgcggttc
tccgacggagatgaagccctggcttcattccactacagccagatcctcgaccgcctcgac
gtcaaatcggacgccgtttgcagacaggctgccgtcgacatcctcgctggccccgcctgc
ggctccgaatacgccgaggaactgcgcagccgggcggcgcaccaggcgggagtgttcttc
gaaaaggccggcgatcacgatttcgcccggcagctctatcgcgccggcgcatcggccgac
tgcaatgaacgcctggtgcgtctgctctacaacgatggcgatcgccccggagccgaggcc
ttgctgcaacggatgatcgaccagcctttgagcgatggcgagcatcttttcgcgaccgac
ttctacgcccgaaagtttggcgggcgacggactggtctctacaccgaactcttgcggtcc
gggcggacgatcacggtggacgacacgcatcgcggcaatcccgaggcaggcgtggcgggc
gtgctgcggcgcgacggcgcgacggtctttcacacggagaacatgctgtggcacaccctg
ttcggcctgctgttctgggatgagttgttcgagagcacgcaattgccgagcggcttcgat
tgggtgccgcattgcctgagagatcgcagcttcagccggttgtttgcggcctcgatcgcg
aaaaaaatcggcgcgatcgaagccgggacggcgctgcccatgatcctgcggaccgttgcg
gcccggtggggacgccccaatggcatctttgcctgggaccattttcagatcgaggccttg
cgcgcgttgctgcagggcgcaaatcccccgggcctcgcgcggatcatccgcgccatgtgc
gaggatttccgcggcatgcgcgacggctttcccgacctgatggtcgtccgcgacggacgc
gtctcgttcatggagatcaaggctgcgggcgacgtcattcgacgcaatcaattgacccgc
cttcaccagctcggcgccgccggcatcacggccgagatcggccgtgtcgactatcgcttc
gatccggaccaggactacgtcgtcgtggatatcgagaccactggctcgttctcgaacggt
gaccgcatcaccgaaatcggcgcggtcaaggtccgcaatcatcaggtggtcgacgagtgg
cacagcctgatcaatccacaacgccccatcccctggaagatcacccagctgacagggatc
acgaacgagatggtgcgggacgcccccgtgtttgccgaagtgagcgagagcttcctcgat
ttcatggctgacggcatcttcgtcgcccataacgtcaacttcgattatggtttcatcgcc
tacgagtacaagcggctggagcgtcgcttccggtttccgaaactctgtacgtgcgccggg
atgcgccgccgctacccgggacacgaatcctacggtttgggaaagctgtgcgatatctat
ggaattgcgctgcccaatcatcatcgcgcgctgtgcgacgcgcgggcctccgcgcatctg
ctgaacctcatcaaccacaagcgcgatgacgatttgaccgcggatgtcgaggccgcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system