KEGG   Bradyrhizobium amphicarpaeae: CIT40_14445
Entry
CIT40_14445       CDS       T05700                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
brq  Bradyrhizobium amphicarpaeae
Pathway
brq03410  Base excision repair
brq03430  Mismatch repair
brq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CIT40_14445 (recJ)
   03430 Mismatch repair
    CIT40_14445 (recJ)
   03440 Homologous recombination
    CIT40_14445 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brq03400]
    CIT40_14445 (recJ)
DNA repair and recombination proteins [BR:brq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CIT40_14445 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CIT40_14445 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CIT40_14445 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH ATPgrasp_N
Other DBs
NCBI-ProteinID: AWM01121
UniProt: A0A2U8PU15
Position
3139053..3140894
AA seq 613 aa
MTPPATALPVEAPQAFLGVARSLTDKLWRDRLDARGAAQALAIVQRHQLPELLARVLAGR
GVDIDAVPDFLDPTIRKLMPDPFTVTGMEAAAKRIADAAVKGEKVAIFGDYDVDGATSAA
LLTWHLRHCGLDPLIHIPDRIFEGYGPNVEAVRGLAAKGATLLVTVDCGTTSIEPLAEAK
RLGMSVVVIDHHQAGTELPEVDALVNPNRLDDLSGLGHLAAVGLVLVTLVAVNRELRQRG
FWNAEMPEPDLLGMLHHVALGTVADVAPLIGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDSVEAARIAAELDRLNSERRVIE
QAAEAQAEAEALASIGLEDKLSVIVTASEGWHPGVVGLVASRLKEKFSRPAFAIALEPGG
IGTGSGRSIAGVDIGKAVRQAVTDGILLKGGGHAMAAGVTLRKEKLAEFRAYLENALARD
VAEARHVNELYIDGAVSARAVTTELAATLNRAGPFGSGNPEAVLALPAHQLVFADEVGQA
HLRLRFKSGDGAIVNGIAFRSVGQKLGNALLANRGQQLHVAGSLSVDRYQGAERVQFRVI
DVALPDQGPSVIR
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgacgccgcctgcaaccgccttgcccgtcgaagcgccccaggcgtttctcggcgtcgcg
cgctcgttgaccgacaagctctggcgcgaccggctggatgcccgcggggcggcccaggcg
ctcgctatcgtgcagcggcaccagctccccgaactgctggcccgggtgctggccggccgc
ggcgtcgacatcgacgcggtgcccgactttctcgatccgaccatccgcaagctcatgccg
gacccctttaccgtgacgggaatggaggccgcggcgaagcggatcgcggatgccgcggtg
aagggcgaaaaggtcgccatcttcggcgactacgacgtcgacggcgcgacctcggcggcg
ctgctcacctggcacctgcgccattgcgggctcgacccgctgatccacatccccgaccgc
atcttcgagggctatggccctaatgtggaagccgttcgcgggctggcggccaagggcgcc
acgctgctggtcaccgtcgattgcggcaccaccagcatcgagccgctcgctgaagcaaaa
cggctcggcatgtccgtggtcgtgatcgaccatcaccaggccggtacggagctcccggag
gtcgacgcgctggtcaatccgaaccggctcgacgatctttccggcctcggtcatctcgcc
gcggtcggtctcgtgctggtgacgctggttgcggtcaatcgcgagctgcgccagcgcggt
ttctggaatgcggaaatgcccgaaccggatctgctcggcatgctgcaccacgtcgcgctc
gggacggttgccgacgtcgcccccctgatcggtctcaaccgcgctttcgtcgccaagggg
ctgatcgcgatgcggcggcgcgaccatgtcggccataccgcgctgatggatgtggcgcgg
ctcaacgggccgccggaggcctggcatctcggcttcatgctggggccgcgcatcaatgcg
ggcggccgcatcggccgcgcggatctcggcgtgcggttgctgcttgaaggcgacagcgtc
gaggccgcgcggatcgccgccgagctcgaccgtctcaacagcgagcggcgcgtcatcgag
caggcggccgaagcgcaagccgaagccgaggcgttggcctcgatcgggctggaggacaag
ctcagcgtcatcgtcacggcgtccgaaggctggcaccccggcgtcgtcggcctcgttgcc
tcccgcctgaaggaaaagttttcgcgacccgctttcgccattgcgctcgagcccggcggc
attggcaccggatcggggcgctcgatcgcaggcgtcgatatcggcaaggccgtgcggcag
gcggtcactgacggcattctgctgaaaggcggcggccacgcgatggccgcgggcgtgacg
ttgcggaaggagaagctcgccgaatttcgcgcctatctcgagaacgcgctggcgcgggac
gtcgccgaggcgcgccacgtcaacgagctctacatcgacggcgcggtctccgcgcgcgcc
gtgacgacggagcttgcggcgacgctgaaccgcgccggtccgttcggcagcggcaatccg
gaagccgtgctggcgctgccggcacaccagctcgtgtttgccgacgaagtcgggcaggcg
catctgcgcctgcgcttcaagtcgggcgatggcgccatcgtcaacggcatcgcgttccgc
tcggtcggccagaagctcggcaacgcgctgctggccaatcgcggccagcaactgcatgtc
gccggctcgctctcggtcgatcgctaccagggcgccgagcgggtgcaattccgcgtcatc
gacgtcgcgctaccggaccaggggccatccgtgattagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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