KEGG T06008: C1N80

Brachybacterium sp. SGAir0954: C1N80_03305

Entry

C1N80_03305       CDS       T06008

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

brr Brachybacterium sp. SGAir0954

Pathway

brr03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:brr00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C1N80_03305
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brr03400]
    C1N80_03305
Enzymes [BR:brr01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     C1N80_03305
DNA repair and recombination proteins [BR:brr03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     C1N80_03305

SSDB

Motif

Pfam:

Exo_endo_phos

Other DBs

NCBI-ProteinID:

QCR52698

UniProt:

A0A4P8TFS2

Position

complement(742438..743355)

AA seq 305 aa
MLRIATANVNGIRAAHRRGFGDWLAGRGCDVVALQEVRAQAAVLPEGAFGDFHVALETGT
LPGRNGVAVLTREPPAAVRTWSGSALVGGPSAPLREVPATDHVTLARGLGPFAHQGRYLE
VDLADAPVTIACLYLPKGGLPAHLQRPERMREAPDGGAKYTRKMGFMAAFSRYLTRTRRA
AAAQGREFLLMGDLNIAHTERDLAAWRRNQQTDGFLPEEREWLSAQLSSRTLVDVVRRLH
PDTAGPYSWWSWLGQSFANDAGWRIDYHLATPRLARSAVRAEVDRDHLGVRLSDHSPVVV
DYALD

NT seq 918 nt +upstreamnt +downstreamnt
atgctccgcatcgcgaccgccaacgtcaacgggatccgtgccgcgcaccgccgcgggttc
ggcgattggctcgccggccgcggctgcgacgtggtcgccctgcaggaggtgcgcgcgcag
gcggcggtcctgcccgaaggcgcgttcggcgacttccacgtggcgctcgagacgggcacg
ctgcccggccggaacggggtcgcggtgctcacgcgggagccgccggcggcggtgcgcacc
tggtccgggagcgcgctcgtcggcggcccgtcggccccgctgcgggaggtgccggcaacg
gaccacgtgactctcgcacggggcctcggccccttcgcccaccagggccgttacctcgaa
gtggacctcgcggacgcgccggtgacgatcgcctgcctatacctgcccaagggcggcctc
cccgcgcacctgcagcgcccggagcggatgcgggaggcgcccgacggcggcgcgaagtac
acgcgcaagatgggcttcatggcggcgttctcccgctatctcacccgcacccggcgggcc
gcggccgcgcagggccgggagttcctgctcatgggcgacctcaacatcgcgcacaccgag
cgggacctcgccgcgtggcgccgcaaccagcagaccgacggcttcctgccggaggagcgg
gagtggctgagcgcgcagctgtcctcccgcacgctcgtggacgtggtgcgtcgcctgcat
ccggacacggcgggcccgtactcgtggtggtcgtggctcgggcagtccttcgccaacgac
gccggctggcggatcgactaccacctcgcgacgccgcgcctggcccgttccgcggtgcgc
gcggaggtggaccgcgaccacctcggcgtgcggctctccgaccactcccccgtggtcgtc
gactacgccctggactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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