KEGG   Bradyrhizobium cosmicum: S23_01100
Entry
S23_01100         CDS       T01796                                 
Symbol
rpoN
Name
(GenBank) sigma 54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
brs  Bradyrhizobium cosmicum
Pathway
brs02020  Two-component system
brs02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:brs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    S23_01100 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    S23_01100 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brs03021]
    S23_01100 (rpoN)
Transcription machinery [BR:brs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     S23_01100 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: BAL73337
Position
complement(123386..125008)
AA seq 540 aa
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLTTFVEEELERNPLLERANDEPPAGE
APAEAGQYGDHDDFGGGGSDEPGGGPGEAFEPGQEEWMSKDLGTRAEIEQTLDTGLDNVF
SEEPAEAAARTAQDAAPTTYTEWGGGASGDEDYNLEAFVAAETTLGDHLAEQLAVAFAGP
AQRMIGQYLIDLVDEAGYLPPDLGQAAERLGASQQAVDDVLAVLQKFDPPGVCARNLSEC
LAIQLRELDRYDPAMQALVEHLDLLAKRDIAGLRKICGVDDEDIADMIGEIRRLNPKPGM
KFGTARLQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSELSKKIGKDGDKSYFT
DALQNATWLVRALDQRARTILKVATEIVRQQDGFFTHGVAHLRPLNLKAVADAIQMHEST
VSRVTANKYMATNRGTFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDSEAPAAILSD
DTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSALGNVISTAMSDRSRNTEPA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcgctcacgcagagattagagttccgacaatcgcagtcgctggtcatgacgccgcag
ctgatgcaggcgatcaagctgctgcagctgtccaatctcgatctcacgaccttcgtggaa
gaggaactcgagcggaacccgctgctggaacgggccaacgacgagccccccgcgggtgaa
gcgccggccgaggccggccagtacggcgatcacgacgatttcggcggcggtggcagcgac
gagccgggcggcggtccgggcgaggcgttcgagccgggccaggaagaatggatgagcaag
gatctcggcacccgcgccgagatcgagcagaccctggacacgggcctggacaacgtcttc
tccgaggagccggccgaggccgcggcccgcaccgcgcaggacgccgcgccgaccacctat
acggaatggggcggcggtgcctccggtgacgaagactacaatctggaagcttttgtcgca
gccgagacaacgctcggcgaccatctcgccgagcagctcgcggtggcctttgccgggccg
gcgcagcggatgatcggccagtacctgatcgacctcgtcgacgaggccggctacctgccg
cccgatctcggccaggccgcggagcgccttggtgcatcgcagcaggccgtcgacgacgtc
ctcgcggtgctgcagaaattcgatcctcccggcgtctgcgcacgcaatttgagtgaatgc
ctggcgatccagcttcgcgagctcgaccgttacgaccccgcgatgcaggccctcgtcgag
catctcgatctgcttgccaagcgtgacatcgccggcctgcgcaagatctgcggcgtcgac
gacgaggacatcgccgacatgatcggcgagatccgccgcctcaatcccaagcccggcatg
aagttcggcacggcgcggctccagaccatggtgcccgacgtctacgtccgcccgggtccc
gacggcggctggcatgtcgagctcaacagcgacaccttgccgcgcgtgctggtcaaccag
acctactattccgagctgtcgaagaagatcggcaaggacggcgacaaatcctatttcacc
gacgcgctgcagaacgcgacctggctggtgcgcgcgctcgaccagcgcgcccgcaccatc
ctgaaagttgcaaccgagatcgtgcgccagcaggacggcttcttcacgcacggcgtggcg
cacctgcggccactgaatctgaaggccgtcgccgacgccatccagatgcacgaatccacg
gtgtcgcgcgtcaccgccaacaaatacatggcgacaaatcgcggcacattcgagttgaaa
tatttcttcacggcgtcgatcgcctcggccgacggcggcgaggcgcattcggccgaagcc
gtgcgtcaccacatcaagcaactgatcgattcggaagcgccggccgcgatcctgtcggat
gacaccatcgtggaacggttgcgggcctcgggcattgatattgcccgccgcacggtcgcg
aagtaccgcgaagccatgcgcattccgtcctcggtgcaacgccgccgcgacaagcagagc
gctcttggtaacgtcatctccaccgcaatgtccgatcgctcccgcaacaccgagccggcc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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