KEGG   Brachybacterium avium: CFK39_14795
Entry
CFK39_14795       CDS       T04950                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
brv  Brachybacterium avium
Brite
KEGG Orthology (KO) [BR:brv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brv03016]
    CFK39_14795
Enzymes [BR:brv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CFK39_14795
Transfer RNA biogenesis [BR:brv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CFK39_14795
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ASK66864
UniProt: A0A220UF54
Position
complement(3304251..3305447)
AA seq 398 aa
MTDSPAVTALNAPRDGLVPVTDRIQPLLAWCEAAASAPGEQVSVDAERASSYRYSSRAYL
VQLRTDTAGTALIDPLAFTMPGTLRSLLAEREWVLHAAGQDLPSLAEIGLRPGSLFDTEL
AARLLGMERVGLGAVVEDTLGLHLAKEHSAADWSKRPLPEGWLTYAALDVEVLVEVRDIL
QERLRAAGKEEWAAQEFEHERTREHGPTRSSSWRGLHGLGTLRSVRQLAVAREMWTRRDE
IAGAEDLSPHRVIKDRDLVAAAKEAPRGREAFDRALPSKMRRKDVWWQAARTGLELPAAH
LPERTERSYPPPHKLWSKKYPEVSERYQLVRTATNERAEDLEMPPENLLQPALLRRWVWE
HEQAPAEPELADQLAELGARPWQVEQAAPVIHRALTEG
NT seq 1197 nt   +upstreamnt  +downstreamnt
gtgactgattctcccgccgtcaccgctctgaatgctccgcgcgacggtctggtgccggtc
accgaccgcattcagccgctgctggcgtggtgcgaggccgcggcctccgctccgggggag
caggtcagcgtggatgccgagcgcgcctcgagctaccgctacagctcacgcgcctatctg
gtgcagctgcgcaccgatacggccggcaccgctctgatcgatccgctggccttcaccatg
ccggggacgctgaggtcgctgctcgccgagcgcgagtgggtgctgcatgctgcgggccag
gatctgccgagcctcgccgagatcggattgcggcccggctcgctcttcgacaccgagctc
gccgcccggctgctgggaatggagcgggtgggtctcggcgcggtcgtcgaggacactctg
ggactgcacctggccaaggagcattccgcggcagactggtcgaagcgaccgctgccggag
ggctggctcacctatgcggccctcgacgtcgaggtcctcgtcgaggtccgcgacatcctg
caggagcggttgcgggccgccggcaaggaggaatgggccgcgcaggagttcgagcacgaa
cgaacccgtgagcacggacccacccgctcctcgagctggcgggggctgcacggcctcggc
actctgcgttcggtccgtcagctcgccgtggcgcgcgagatgtggacccgccgggatgag
atcgccggtgcggaggatctctccccccaccgcgtgatcaaggatcgtgatctggtggcg
gcggcgaaggaggctcctcgggggagggaggccttcgacagggctctgccgtcgaagatg
cgtcggaaggacgtctggtggcaggcggcccggaccggtctggagctgccggccgcgcat
ctgcccgagcgcaccgagcgctcctatcccccgccgcacaagctctggtcgaagaagtac
cccgaggtgtccgagcgctaccagctggtgcgcactgcgacgaatgagcgcgccgaggac
ctcgagatgccgcccgagaacctgttgcagcccgcgctgctgcgccggtgggtatgggag
cacgagcaggcgccggcggagcccgagctcgccgatcagctggccgagctcggggcgcgg
ccctggcaggtcgagcaggcggcgccggtgatccatcgggcgctgaccgagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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