KEGG   Bipolaris sorokiniana: COCSADRAFT_134693
Entry
COCSADRAFT_134693 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03030  DNA replication
bsc03410  Base excision repair
bsc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCSADRAFT_134693
   03410 Base excision repair
    COCSADRAFT_134693
   03420 Nucleotide excision repair
    COCSADRAFT_134693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsc03032]
    COCSADRAFT_134693
   03400 DNA repair and recombination proteins [BR:bsc03400]
    COCSADRAFT_134693
Enzymes [BR:bsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     COCSADRAFT_134693
DNA replication proteins [BR:bsc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    COCSADRAFT_134693
DNA repair and recombination proteins [BR:bsc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      COCSADRAFT_134693
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 19130939
NCBI-ProteinID: XP_007696220
JGI: Cocsa1_134693
UniProt: M2T2H9
Position
Unknown
AA seq 2235 aa
MAPRRAGQPFRRVGKNGNASYGPRKPKTVDASTLRSGEATSQNEKLESTRLAHRIDETMG
FARFDSGKKRVGWLVNMHSTTVEDEDVPGGRAGVDFYFIGEEGDTFKATLEYDPYFLLAV
KKGREQDVEEYCKRAYEGLVKTVKIIEKEDLSMPNHLTGYRRKFLMLTFANVNDLLAVRK
GVAPIVEKNKKNINAMDTYAEVANGNANFDFFDNEDYEYEKRLTTTVDASDFIVDIREYD
VPYHVRVAIDKDVRIGNWYTVEAKHGVVSMTCVEDRLTPADPVVMAYDIETTKLPLKFPD
AAIDQIMMISYMIDGQGFLITNREIVSEDIQDFEYTPKPEYHGPFMIFNEPDEKALLERF
FEHIKIAKPTVMVTYNGDFFDWPFVEARASVQGIDMYQEIGFRKNSEDIYQSDYCAHMDA
FAWVSRDSYLPQGSRGLKAVTMAKLGYDPDELDPELMTPYAAERPQTLAEYSVSDAVATY
YLYMKYVHPFIFALCKILPLGPDDALRKGTGTLCEMLLMVQAYQKGIVLPNKHQAPKEAF
WNGHLLESETYVGGHVEALEAGVFRSDIAYNFAVDPTAIDELVGDLDAALKFSIEVEEKK
KMEDVTNYDEVRAEIVDKLMQLKNTPNRSERPLIYHLDVASMYPNIMTTYRLQPDSMINE
SNCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMVRNALENEQFPGRFPNSPKRSFQ
ELSEDEQAALVRKRLTDYSKKIYHKVHDATTIEREAIICQRENPFYVDTVSGFRDRRYDF
KGKQKVWKGKTEALKAAGAPAAEIEDAKKMIVLFDSMQLAHKVILNSFYGYVMRKGSRWY
SLEMAGVTCLTGARIIQLARSLVERIGRPLELDTDGIWAILPATFPENFSFKLSNGKKLT
ISYPCTMLNHLVHAQYTNHQYETLVDPVNFRYEKHSDNSIFFEVDGPYKAMILPTSKEED
KNLKKRYAVFNHDGSLAELKGFEVKRRGELKLIKNFQGQIFKFFLEGTTLEETYGAVARV
ANRWLDILDTRGATLADEELIDLIVENKNMTKTLEEYGSQKSTAITTAKRLAEFLGEQMV
KDKGLNCKYIISKTPRNAPVTERAVPLSIFSAEESVKRYFLRKWLRDDPGEMDIRSVLDW
DYYRERLASVIQKLITIPAAYQKVRNPVPRVPHPDWLDRRIRQKEDKMQQTKMTDMFSKK
VLTNGDANVANNKVTGDLEDFGSAKLTQNQSQMKKGIVTKMVAKRKEPEPAVPIVDPYAA
LPKVVPSIDEDYSGWLVYQKQKWKIQREARKRRRQLFGEKAVDASDAIGSFFRNQAQSLY
ISTWQLVQLRPTETPGEVRAFVLIDKKIHALKIIVPRQLYLNLRSEELPDVSISGCSVEK
VVNHTLPNGHPSIHLFKLQMSEETYVHEADGISALFNHSSVEGVYEKQVPLNIRAILELG
SVCTFDESQKGVLGKGLEHGFDLSALRKVPTKEPYLAEAPFSYVYLYHVSSGDRNIYAVF
STSKSDAHIIIQNKSKDSQGMPNVDRIYRDALQRRMGDNDGEPWQNMIKYQEDLHFKTTI
VTTKRKALLEIGDVIKRMKADETGPIIAVVQSPNQALLSHDVPALKDLPILSLNPDESDK
QLPPLGWQSFIAKRLVGHYLDLGSWVAHLLELARYGDIPLCNLESNDPRFLIDVAYARRL
QKDRVILWWSGQAKPDHAGYEKDDVLGPLETVEMPSINNPGTYSSVCIDINLRNLAINTI
LSSSLINELEGADSVSFNPAAPSYDSANDGSNVIYSDNAFASAGITVLREMVKAWWVEAV
QAGHGFSMADVMVQHLVRWVSSPGSFLYDRSLHYYVQMMSKKTLQQLMTDFKRVGSHIVF
ASPNRLLLQTTKAEIGNAYAYSQYIIKTIKAKPLFQFMELEIKEFWDYLVWYDEFNYGGK
GCDKVTEDEVQPVENIMCWQLAQFLPQKFQPAFNDWVIEFIELMHSRKRPAITEDGSTPR
PTQIPLRPLTVDPNEQTQILPKTFTKPLSKQMNAFAKKQHAEVLDPLFASEYVFPELPGS
HLKLTNPVLQLVKSIMQVLSLDRAISLEARALRKELLNLFDIREFSAEATFTNPSAALVV
RGVICDDCTSSRDLDLCRDSSLLPVILPDSDAAPVMPKWKCDNCDSPYDKRCIEEQLVGE
VQKMVLEWCTQDLKCAKCKRLRSNEFMEHCACAGEWAPTKNKTEIKKKMGVYGNVARFYT
LGMLEAVVEECLSSL
NT seq 6708 nt   +upstreamnt  +downstreamnt
atggcgccccgacgcgcaggccagccctttcgccgggtaggcaagaatggaaacgcatcc
tacggcccacgcaagcccaagacggttgacgcctcgacattacgaagtggagaggctact
tcacagaacgaaaagctggaatctacacgcctggcacaccgcatcgatgagactatgggc
ttcgcacgtttcgattcggggaagaagagagtgggatggctcgtcaatatgcactcgaca
acagtcgaagacgaagatgtcccgggtggcagagctggtgttgacttctacttcattggc
gaggaaggcgacacattcaaagcaaccctcgaatacgacccatactttctgctggcggtc
aagaaggggagggaacaggacgtggaggaatattgtaaaagggcatacgagggcctggtc
aagacggtgaagatcatagagaaagaagacttgagcatgccaaaccatcttactgggtac
cgaagaaaatttctaatgcttaccttcgcgaacgtcaacgatcttcttgctgtgcggaaa
ggcgttgctccgatagtagagaagaacaaaaagaacatcaacgccatggatacctacgcc
gaggtggccaatggcaatgccaactttgattttttcgataatgaagattatgagtacgag
aaacgacttacgactaccgttgatgcaagcgatttcattgtagatattcgggaatatgac
gttccctaccacgtgcgagtagcaatcgacaaggacgttcgaattggaaactggtacaca
gtcgaggccaaacatggcgtagtgagcatgacgtgtgtagaggatcgcctgacacctgcg
gatcctgtggtaatggcctacgatatcgaaacgacgaagctcccattgaagtttcccgac
gcggccattgaccagatcatgatgatatcgtacatgattgacggccagggatttctgatt
acgaaccgcgagattgtctcagaagatatccaagatttcgaatatacgccgaaaccagaa
taccacggaccgttcatgattttcaacgaaccagacgaaaaggccctgctagaacgattt
ttcgaacacataaaaatagccaaacctacagtcatggtcacgtacaacggagacttcttc
gattggccttttgtggaggcaagagccagcgttcaaggtatcgatatgtaccaagaaatc
gggttcaggaagaacagcgaggacatttatcagtcggactactgcgcacatatggacgcg
tttgcttgggtcagtcgagacagttatcttccacaaggtagtcgtggtttgaaagctgtc
acaatggccaaactgggatacgatccagacgagctcgaccctgaactcatgacgccttac
gcagccgagcgacctcagactcttgccgaatactccgtttccgatgccgtcgcaacctac
tacctgtacatgaaatatgtccaccccttcattttcgcgttgtgcaaaatcttgcccctt
ggaccggacgatgcgctacgtaagggtacgggtactctctgtgagatgttgttgatggtg
caagcgtaccagaagggcattgtattaccaaataaacatcaagcgccaaaagaagcattc
tggaatggccatctacttgaatcggagacttatgtcggaggtcacgtcgaagctctcgaa
gctggcgtgtttcgaagcgacattgcgtacaattttgcagtggatcctaccgctatcgat
gaattggtcggtgatcttgatgctgcgctcaagttcagtattgaggtggaagagaagaaa
aagatggaggatgttaccaattacgatgaggtcagggctgagattgtcgacaagctgatg
cagctcaagaacacaccaaatcgtagcgagcgacctcttatctaccacttggatgttgcg
tctatgtatccgaacatcatgacaacttacaggttgcaacccgactccatgatcaacgag
tccaattgcgcggcttgtgactttaaccgccctggaaagacatgcgatcgtcggatgcca
tgggcctggagaggtgaatatctcccagctaaacgcgatgagtacaacatggttcgcaat
gcactggagaacgaacaattccctggaagatttcccaactcgccaaagcggtcgtttcaa
gagctctcagaagacgagcaggccgctctagtcagaaaacgcttgacggactactctaag
aagatctaccacaaggttcacgatgcgacgacaatcgagcgcgaggccatcatctgtcag
cgtgaaaacccattctatgttgatactgtcagcggtttccgtgaccgacggtatgacttc
aagggcaagcaaaaggtttggaaaggcaagacagaagcgttgaaggcagcgggtgcccca
gcagctgagattgaagacgcgaagaagatgattgtcttgttcgattccatgcaactggcc
cacaaagttattctgaactccttctatggatatgtcatgcgaaaggggtcacgctggtac
tctctggagatggctggcgttacctgtttgactggtgctcgcatcattcagttggcgcgt
tcccttgtcgaacgtatcggccgacccctggaattggataccgatggtatttgggccatc
ctaccagcgactttcccagaaaacttttctttcaagctcagcaatggcaagaaactaacc
atctcttatccatgtaccatgttgaaccatctagtacatgcgcagtacaccaaccaccag
tacgagacgttggtagaccctgtgaatttccgatatgagaagcacagcgataactccatc
ttcttcgaagttgatggcccttacaaggctatgatcttgccgacttcgaaagaagaggac
aagaacttgaaaaagcgttatgctgtgttcaatcatgatggtagtttagcagaattgaaa
ggtttcgaagtgaagcgtcgtggtgagctgaagctgatcaagaacttccaaggtcagatt
ttcaagtttttcttggaaggcaccactcttgaagagacctacggtgctgttgccagagta
gcgaacaggtggcttgatattctggatacacgcggagcaactttggctgacgaggagcta
attgatcttatcgtcgagaacaaaaacatgacaaagacactggaggagtacggatcgcaa
aagtcaaccgctatcacaaccgctaagcgtctggccgagtttctcggcgagcaaatggta
aaagacaagggactgaactgcaagtacattatctccaagacaccaagaaatgcgcctgtt
accgaacgcgccgttcccttgtccatcttttcggccgaggaatcagtaaagcgatacttt
ctgaggaagtggttgcgagacgatccaggggagatggatattcggtcagttctagactgg
gattattaccgcgagcgtctagcttctgtcatccagaaactcatcacgatccctgcagca
tatcagaaagttcggaatcccgttcctagggtgccacaccctgattggcttgaccgtagg
attcgtcagaaggaggacaaaatgcagcagacaaagatgacggacatgttcagcaagaag
gtcctaaccaacggtgacgctaatgtcgcgaacaacaaggtcactggcgatttagaagat
tttggctccgccaagttgacgcagaaccaatcacagatgaaaaagggaattgtcactaaa
atggtcgcaaagcgcaaagaacctgagcctgcagtaccaattgtggatccttatgctgct
ttacctaaagtcgtgccaagtatcgatgaagactattccggctggttggtgtaccagaaa
cagaaatggaagattcaacgcgaggcacggaaacgccgacgccaattgtttggagagaaa
gcagttgacgcatccgacgccattggtagcttcttcagaaaccaggcgcaatccctctac
atcagcacatggcaactcgtacaacttcggccaacagaaacaccgggagaggtcagagcc
tttgttctcattgacaagaagatccacgctctcaaaatcatcgtaccgcgacaactatac
ctcaatctgaggagtgaagagcttccagatgtatcgatcagtggatgttcagtagaaaag
gtggtcaaccatactttgccgaatggacatccctcgattcatctgttcaaacttcagatg
tcagaagagacctacgtccatgaagctgacggcatctcggctctgttcaatcactctagc
gtcgagggtgtctacgagaagcaagttccgttgaacattcgggccattcttgagctggga
agtgtttgcacattcgacgagtcccagaaaggtgttcttggaaaaggtcttgagcatgga
ttcgacctctccgcactgcgaaaagtgccgaccaaggagccatatctcgccgaagcaccc
ttcagctacgtgtatctgtaccatgtcagcagcggagaccgtaatatctatgccgttttc
tcaacgtcgaagagcgatgcccacataatcatccagaacaagtccaaagactcgcaaggt
atgccgaatgttgatcgtatctatcgcgatgccctacaacgacgaatgggagacaacgac
ggtgaaccctggcaaaacatgatcaagtaccaggaggaccttcacttcaagacgacaata
gtgaccaccaaacgcaaagctctgctcgagataggcgatgtcatcaagaggatgaaagcg
gatgagactgggccaatcattgccgttgtgcaatctccgaaccaggcccttctctcacac
gatgttcctgccctgaaagacctgcccatcttgtcactcaaccccgacgagtctgacaaa
caattaccaccattgggctggcagtcctttattgccaagcgattggtaggacattacctt
gatcttgggtcttgggttgctcatctactggagctggctcgctatggagatattccgctc
tgcaatctcgagagtaacgatccacgcttcctgattgatgtcgcatatgccagaaggcta
caaaaagaccgcgtgatcttatggtggtctggccaagcgaaaccggatcatgctggatac
gagaaggatgatgtccttggacctcttgagacggtagaaatgccatcaatcaacaacccg
ggtacctactcatctgtgtgtatcgatatcaatctacgcaacctggctatcaacaccatc
ctgtcttcgtctcttatcaacgagcttgagggcgcagattccgtttccttcaatcctgct
gcaccatcatacgactcggctaatgacgggtccaatgtcatctactcagacaacgccttt
gcgagtgcgggtattacagtccttcgtgaaatggtgaaggcttggtgggttgaagctgtc
caggctggccacggctttagtatggccgatgtcatggtacagcaccttgtccgttgggtc
agcagtcctgggtcgttcctctacgatcgctctctgcactactatgtccaaatgatgtcg
aagaagacactacagcaactcatgactgatttcaagcgagtgggttcacacattgtcttt
gccagtccaaaccgccttctcctccagacaaccaaggctgaaattggcaatgcatacgcc
tacagccagtatatcataaagactatcaaggcgaagccactgttccagtttatggagctt
gagatcaaagaattttgggattatcttgtttggtatgacgagttcaattatggaggcaag
ggctgtgacaaagtgaccgaagacgaggtccaacctgtggagaacatcatgtgctggcag
cttgcacagttcttgccacaaaagttccagccagccttcaacgactgggtgattgagttc
attgagctcatgcactcacgtaaacgcccagctatcactgaggatggctcgacaccacga
ccaactcaaattcctcttcgacctctgactgtggaccccaatgagcagacacagatacta
ccgaagacattcacaaagccgctgtccaagcagatgaatgcctttgcgaagaagcagcac
gcggaggtgctggatccactattcgcatcagaatacgtcttcccagaacttccaggctcg
cacctcaagcttacgaatccggtcctccaactcgtcaaaagcatcatgcaagtcctgagt
ctggaccgtgcgatatcgctcgaagcacgcgcgttgcgaaaagagctgctgaatctcttc
gatatccgcgaattcagcgcagaagcaacatttaccaacccaagcgccgcactcgtcgtt
cgaggcgtcatctgcgatgactgcacatcctcacgcgatctggatctctgccgcgactcc
tcacttctccccgtcattcttcccgacagcgacgccgcccctgttatgcccaaatggaaa
tgcgacaactgcgactctccatacgacaagcgttgcatcgaagagcaactcgtcggcgag
gtacaaaaaatggttctcgaatggtgcacgcaggacctcaagtgcgcaaagtgcaagagg
ctacgtagcaacgagtttatggaacattgtgcctgtgcgggagaatgggcgcctaccaag
aataagactgagattaagaagaaaatgggtgtttatggcaacgtggctcggttctacact
ctgggcatgttggaggcggttgtggaggagtgtttatcgagtttatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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