KEGG   Bipolaris sorokiniana: COCSADRAFT_145028
Entry
COCSADRAFT_145028 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    COCSADRAFT_145028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bsc03009]
    COCSADRAFT_145028
Ribosome biogenesis [BR:bsc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    COCSADRAFT_145028
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WDR54 Nup160 eIF2A DIKK1-2-4_C-subdom1 Rtf2
Other DBs
NCBI-GeneID: 19131335
NCBI-ProteinID: XP_007701277
JGI: Cocsa1_145028
UniProt: M2T1V1
Position
Unknown
AA seq 963 aa
MVKSYSKYEQTDAFGVVATATSNIIWTPEGLTQPGSNRPAGAGRAYAAANEEVLCWDIKK
SELVSRWRDNSCTEEVTVIRRSDMDPDVFAVGYADGSIRIWDARTSTVIITFNGHKSAVT
VLAFDQTGVRLASGSKDTDIIIWDLVSETGLFKLRGHKGQITGLHFIHPEESPQENGTDD
EDVDMDPDQAFLLSTSKDALIKIWDVTTQHCIETHIAQTNGECWALGVSLDGSGCITAGN
DGELKVWAIDQAGLRKAGSKIGEATDLEYLTPRGILYRQGKDRTQGISFYSKADYIAVHG
AEKAVEIWRIKTPEEVRKSLIRKRKRRKEKAKNETKGDAQEEADAEETVNVADAEIGEVF
VPYVTIRTAGKVRSVAWMHIKGSKKLQLLVGTNNNLIDVYEIPQKSKSKSEEAPDYSRTL
AVELSGHRNDVRALALSSDDRMLASASSGGLKIWNVKTQNCLRTLECGYALCCAFLPGDK
IVVVGTKDGDIELYDIAASTLLDKVSAHEGAVWTMQVHPDGKSLITGSADKSVKFWNFDI
IQEEIPGTKRTTPRLKLIQSRILKVNDDVLSVHVSPDSRLLAVATLDNTVKVFFVDSLKL
FLNLYGHKLPVLNMSISGDSKLIATCSADKNVRIWGLDFGDCHKALFGHEDSIMQISFIP
HPVDGDERHLLFSASKDRTIKSWDGDKFQQIQKFKGHHGEIWAMTVARTGDFIVTASHDK
SIRIWTRSDEPIFLEEERERELEEMYEKTLATNLEDEEDPNGERAEAVDASKQTITTLTA
GERIQEALDLGMVDLEVVRDWEIQKKSNPKIAPPQRDPLFLALGNISAERHVLNTLAKIP
AAQLHDALLVLPFSSLPALFTFLAIWVRKQWNITLTCRVLFFMLKTHQKQIVASRELKTV
IEGMRNDLRSTLMGNKDLIGFNVAAMRFVGERVDEAQLVRWEDVDKLEEEKKNRKKRGFV
DVA
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggtcaaatcctacagcaagtatgagcagacggacgctttcggcgtggtcgcgactgct
acctcgaacatcatctggaccccagaaggtctgacacagccgggctctaaccggcctgct
ggcgctggacgcgcatacgccgctgcgaacgaggaggttctgtgctgggatataaagaaa
agcgagctcgtgagccggtggcgagataactcttgtactgaagaagtcaccgtcattcgc
cgaagcgacatggatccagatgtctttgccgttggctacgccgatggcagcatacgcatc
tgggatgcgcgaacgtcaacggtcatcatcaccttcaacggccacaagtctgcagtcact
gtccttgctttcgaccagaccggcgttcggctagcaagtggttccaaagatacagacatc
attatatgggatctagtttcggaaacaggcttgttcaagctaagaggacacaagggtcag
attaccggtttgcatttcatccaccccgaagaatcaccccaagagaacggcaccgacgat
gaagatgtcgacatggacccggaccaggcgttcctgctgtccaccagcaaggatgccttg
atcaagatttgggacgtcactacccagcactgcatcgaaacacacattgcgcagacaaat
ggcgaatgctgggccttgggtgtctcactagacggcagtgggtgtatcacggcaggcaac
gatggagagctcaaggtgtgggccattgaccaagccggtttgcgaaaagccggttcgaag
attggcgaagcgacagacctcgagtacctcaccccaagaggcatactataccgacagggc
aaggacagaacacagggcatctcattctattcaaaggccgactacatcgcggtgcatggt
gcagaaaaagctgttgagatctggcgcataaagactccagaagaggtcaggaagagcttg
atcagaaaaagaaagagaaggaaggaaaaggcaaaaaatgagacaaagggagacgcgcaa
gaagaggcagacgcagaagaaacggtcaacgtggcggatgctgagattggcgaagtattt
gtgccatatgtgactatacggacggccggaaaggtgaggtcggttgcttggatgcatatc
aaaggatcgaaaaagttgcagcttcttgtcggcaccaacaacaacctcatcgacgtttac
gagattccgcaaaagagcaagtcgaagagcgaggaagcccccgactattctcggacgtta
gccgttgagctttccggacatagaaacgacgtgcgcgcgctcgcactcagctcggacgac
cgcatgctagcatctgcgtcgagcggaggcttaaagatctggaatgtcaagacacagaat
tgtttgcgcacattggagtgcggatatgcactgtgttgcgcattccttccaggagacaag
attgttgtcgtaggaacgaaagatggcgatattgagctgtatgatatcgcagcatcgaca
ctactcgataaggtttctgcccatgaaggagccgtgtggacaatgcaagtgcaccccgat
ggcaaatcgctcattacaggcagtgcagacaaatcggtcaagttctggaatttcgacatt
atccaggaggagataccaggaaccaaacgtacaacgcctcgcctcaagcttatccagtcc
cgtattctcaaggtcaatgacgacgttctaagcgtacatgtatcgcccgattcacgatta
ctagccgtcgcaaccctcgacaatacggtcaaagtcttctttgtagattcgctaaagctc
ttcctcaacctatatggccacaaactccccgtcctcaacatgtccatctctggcgatagc
aaacttatcgctacttgttccgctgacaagaatgtgcgtatatggggcctagactttgga
gactgccacaaagcattattcggccacgaagacagcatcatgcaaatatcttttatccca
catcccgtcgatggcgatgaacgccacctcctttttagcgccagtaaagacaggacgatc
aagagctgggacggtgacaagttccagcagattcagaagttcaaaggccaccacggtgag
atctgggccatgaccgtggcgcggaccggtgacttcatcgtcacagctagtcacgacaag
agtatacgtatctggacgcgatcagatgagcccattttcctcgaggaagagagagaaaga
gagttggaagaaatgtacgaaaagacacttgcaacaaatctcgaagatgaggaggacccc
aacggtgaacgcgccgaagccgtcgacgccagcaaacaaaccattaccactctcacagcc
ggtgaacgcatccaagaagccctggatctgggcatggtagacctggaggttgttcgtgat
tgggagatccagaagaagtccaaccctaagattgcaccaccgcagcgcgatcctctcttc
ctggctctcggtaatatatcagccgaacgccatgtccttaacactctcgccaagattccc
gcagcacagctccacgacgcactccttgtcctgcccttttcttccctgcctgctctcttt
acctttctcgctatttgggtgcgcaagcaatggaacatcaccctgacgtgccgggttctc
tttttcatgctaaagacacatcaaaagcaaattgttgcaagcagagagttgaagactgtg
attgaaggcatgcgcaacgacctccggagtacgttgatgggtaacaaggacctgattggg
ttcaatgttgcagccatgaggtttgtgggcgagagagtggatgaggcacagttggtcaga
tgggaagatgtggataagctggaggaagagaagaagaacaggaagaagagagggtttgtc
gatgtagcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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