KEGG   Bipolaris sorokiniana: COCSADRAFT_174666
Entry
COCSADRAFT_174666 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
Organism
bsc  Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bsc03009]
    COCSADRAFT_174666
Enzymes [BR:bsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     COCSADRAFT_174666
Ribosome biogenesis [BR:bsc03009]
 Eukaryotic type
  90S particles
   Helicases
    COCSADRAFT_174666
SSDB
Motif
Pfam: DEAD Helicase_C SET ResIII
Other DBs
NCBI-GeneID: 19132923
NCBI-ProteinID: XP_007703751
JGI: Cocsa1_174666
UniProt: M2STG1
Position
Unknown
AA seq 1123 aa
MAAIPDVEGLSECISRAIQEHLSKSNINVAWPQLDNLNHPILRVEAFLEEAGNDNGARAR
SERIASVCWVIYYYRNSHMKWRILTHIQQTVDLTGMRTPAPTQSPAVDDRECDETSPSDE
PHFQESPYPSREQQQENRRKGTGGLRVSQKQSSFQEDLSEHQRQMQIDSRSFPKRKRVAS
DKFVFQPSTLDKLIIGIWEQFQVAPNGSSMDIVRHAQSDATPATMTVLNSAASTVCNSFS
QMNTFCRKVTQASRVCRSIEMIVQARWTELFEEQVQYRSQTRPELSTTKHRKAVFMEACQ
DFAWSEKELRNKMAIWRGYKEVKDAAGWAALVFAGMGIYRFCKYRVGFDNDAMRRLRNLR
KRLEVAADTLHPHWRQLLAIVGESPTLQYPGHPHEWVVFEDGSDPIPLRQTYLTQDPYFS
FEQIDESVIDESVWGCEDPRWTPQTNVIARPGGAYVCALCNEHQSDDPKENSCFCFPLLF
GCVKRKPPPVQVYRTPDGKNNGLVALTAFDRGTGIGELVGLITKGMRHLDVMDSSTQSTS
YQIWQGRVGNYTRFINHSCKPNVQSSTFTWLDTQRVVLVSKGVEAGSEITLDYGDKYWAG
LDKSCLCGESCCSDSGASDQEILEAQSGARKRRRLSPADCSESSASETKAQPAPKPLQVA
PTTISRVKARANGAQSNKTPSQAADVPAVNQKLSFASLNVAPWLVASLASMAIKRPTGIQ
ASCIPEILKGKDCIGGSRTGTGKTIAFSVPILQKWAEDPSGIFAVIITPTRELAIQIYEQ
VKAISAPQSMKPILITGGSDQRAQAIELASRPHVVIATPGRLAEHIRTSGEDTICGLRRV
RFVVFDEADRLLAPGKGSMLPDLETCLSVLPPKETRQTLLFTATVTPEVLALKDQPRAPG
RLPIFVSEVDTEDLAIPPRLQQRYLQTPVTHKECYLHVLLNTPVNSEKSVIIFCNRTKTA
TLLEYMLRLLDHRVTALHSGLKQSDRVNNLARFRAQAARILVATDVAARGLDIPEVALVI
NFDVPRDPDDYIHRVGRTARAGRVGTAITLIGQRDVELVFAIEARVGKKMEEFEEEGVSI
EGRVVRDALKPVTEKKREAMLSIEEGRDVLGKRKVGMQKRRAE
NT seq 3372 nt   +upstreamnt  +downstreamnt
atggctgcgataccagacgttgaaggcctttcagaatgtatcagccgagctatacaagag
cacctctccaagtccaacatcaatgttgcgtggccacaactggataatcttaaccaccct
atccttcgcgttgaggctttcctcgaggaagctggcaacgacaatggagcaagagcgcga
tccgagaggatagcatcggtatgttgggtcatctactactatcgcaactcccacatgaag
tggcgcattctgacacacatacagcaaacagtagatttgacgggcatgagaacccctgcc
cctacacaaagtccggcagtagatgatcgagagtgtgacgaaacctcaccaagcgatgaa
cctcattttcaggaaagtccttacccatcgagggagcagcagcaggaaaaccgcaggaaa
ggtaccggcgggttaagagtatctcaaaagcagtcttcattccaggaagatcttagcgaa
catcagcggcaaatgcaaattgatagccgaagtttcccgaaaagaaaaagagtcgcctcg
gataaattcgtctttcaaccttctacgctagacaaacttatcattggtatttgggagcag
tttcaagtcgcacccaatgggtcatcaatggacattgttcgacatgcgcaatcagacgcc
acacctgccacgatgacggtgctcaatagcgcagcaagtacagtatgtaactcgttcagt
caaatgaacacgttttgtcgcaaggttacacaagcaagccgcgtatgccggtcgattgag
atgattgtacaagcccggtggactgaactctttgaagagcaggtgcaatatcgtagtcaa
acgagaccagagctatcgacgacgaaacatagaaaggccgttttcatggaggcatgtcaa
gattttgcctggtccgaaaaggaattgcgaaacaagatggcaatctggagaggttacaaa
gaagtgaaggatgccgcaggctgggcagcacttgtgtttgccggtatgggtatctaccgt
ttctgcaagtaccgcgtcggattcgacaacgacgctatgcgacgtcttagaaatctgcga
aagcgactggaagtagcagccgatactcttcatccccactggcggcagttgctagcaatt
gtgggcgagtcaccaacccttcagtaccctggacatccgcacgaatgggtcgtgttcgaa
gacgggtccgatccaatacctttacgccagacatatctgacccaagacccatacttttcg
ttcgaacaaattgacgaatccgtaatcgatgaatcggtctggggatgtgaagatccaagg
tggacgccacaaacgaacgtcatcgcaagaccaggcggtgcgtacgtctgcgcactgtgc
aacgagcaccaatcggacgatccaaaggaaaactcttgtttctgcttcccattgctgttt
ggatgtgtaaaacgcaagccgccgcctgttcaggtataccgcactccggatggcaaaaac
aacgggctagtcgctttaacagctttcgatcgcggtaccggcatcggcgaacttgttggc
ctgattacaaaaggtatgaggcatcttgatgtgatggatagctcaacacaatcgactagc
taccaaatctggcaaggaagagtgggaaactatacgcgctttatcaatcatagctgcaag
cctaatgtgcagtcctcgacatttacctggctggatacccaaagggtggtacttgtcagt
aagggagttgaagctggttcagaaatcacattggactatggcgacaagtactgggctgga
ttggacaaatcctgcctatgtggagagagttgctgcagcgattccggtgcgtccgatcaa
gagatattggaggcccagtctggggcgagaaaaaggaggagactttcgcctgccgattgc
agtgaaagttctgcttcggagactaaagctcaacctgccccgaagccactccaagtagca
ccaacaaccatttcgcgcgtcaaagcgagggccaatggcgcgcaaagtaacaaaacgcct
tctcaagctgccgatgttcctgcggtcaaccaaaagctcagttttgcttcactcaatgta
gcgccatggctcgttgcctcgctcgccagcatggcgatcaagcgaccaacggggattcaa
gcgtcttgtatccccgagatcttgaagggaaaagactgtataggaggctcaagaaccggt
actggtaaaaccatcgcgttttcagtgcccattctgcaaaaatgggcagaggatccgagc
ggaatctttgcggtcatcatcacacccacacgcgaacttgcgattcagatctatgagcaa
gtcaaggccatatcggcccctcagtccatgaagccaatcttgattacaggaggctcagac
caacgcgctcaagctattgaacttgcctcgcgcccccatgtcgtgattgcaacaccaggt
cgactcgcagagcacatcagaacctcgggtgaagacaccatctgcgggttgcggcgtgtg
cggttcgttgtctttgatgaagccgatcgtctgcttgccccaggaaaaggctccatgcta
cccgatctcgaaacatgtttatccgtgcttccacccaaagaaacccgacaaacgctctta
ttcactgcaaccgtaacaccagaagttctggctctcaaagatcaaccgcgtgctccgggc
agactaccgattttcgtatcagaagtagacacagaggatctagcaattcccccgcgtctc
cagcaacggtatctccaaacgcccgtcacgcacaaggaatgctacctccatgtgcttctc
aatacgccagtcaacagcgagaaaagtgtcatcatcttctgcaatcggactaagactgct
actttgctcgaatacatgctgcgcctgcttgaccaccgcgtcacggccctgcactcggga
ctcaagcaatccgatcgtgtgaacaatctagcgcgattccgtgcccaagcagctcgtatc
ctggtagccaccgatgtcgctgcccgtggtctcgatatcccagaggtagcgcttgtcatc
aattttgacgtgccacgtgatccagacgactacatccatcgtgttggacgtacggcgcgt
gcgggtcgtgtgggtacggccattacgttgattggacaaagagatgtggagcttgtgttc
gcgattgaagcgcgggtgggcaagaagatggaagagttcgaagaggagggtgtaagtatt
gagggcagagttgttagagatgcgttgaagccggtaacggagaagaagagggaggccatg
ttgagtattgaagaagggagggatgtgctgggcaagagaaaggtgggtatgcaaaagagg
agggctgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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