KEGG   Blastococcus saxobsidens: BLASA_0569
Entry
BLASA_0569        CDS       T01752                                 
Symbol
dnaX2
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
bsd  Blastococcus saxobsidens
Pathway
bsd03030  DNA replication
bsd03430  Mismatch repair
bsd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BLASA_0569 (dnaX2)
   03430 Mismatch repair
    BLASA_0569 (dnaX2)
   03440 Homologous recombination
    BLASA_0569 (dnaX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsd03032]
    BLASA_0569 (dnaX2)
   03400 DNA repair and recombination proteins [BR:bsd03400]
    BLASA_0569 (dnaX2)
Enzymes [BR:bsd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BLASA_0569 (dnaX2)
DNA replication proteins [BR:bsd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BLASA_0569 (dnaX2)
DNA repair and recombination proteins [BR:bsd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BLASA_0569 (dnaX2)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_16 AAA_22 Mg_chelatase DAGK_cat AAA_5 DNApol3-delta_C
Other DBs
NCBI-ProteinID: CCG01526
UniProt: H6RPV7
Position
551348..552547
AA seq 399 aa
MSAPVKAPTEGVWTQLVGQPAVVADLRAAIADPTAMTHAWLFTGPPGSGRSVAARAFAAA
LQCPAGGDGTCHECRTVLAGTHADVHVVVPDGLSIGADEARGLIRVAGRAPSGGRWQVVV
VEDADRMTESASNAILKMIEEPPPRTVFLLCAPSLHPDDVPVTIRSRCRVIGLRTPPVGA
IADVLARRDGVDPALAAWSAAASGGHVGRARRLARDEEARLARKAVLDVPLRLVSLAACL
DAADDLVGSAKEETDAATDALDGSETEALKTSLGVGARGPGVVAATRGGAGQLKELERRQ
KSRATRIGRDSLDRALVDLAGLYRDALVLDAAQSSPDHPAPTLNHPDRRADAEELARRIG
AEGALRRIDAILACRQALERNVKPQVALEALTVALRLPA
NT seq 1200 nt   +upstreamnt  +downstreamnt
gtgagcgcgccggtgaaggcgcccacggagggcgtctggacccagctggtcggccagccg
gccgtcgtggccgacctgcgggcggcgatcgccgatcccacggcgatgacgcacgcctgg
ctgttcaccggcccgcccggctcgggccggtcggtggccgcgcgggccttcgccgcggcg
ctgcagtgcccggcgggcggcgacggcacctgccacgagtgccgcacggtgctcgccggc
acgcacgccgacgtgcacgtcgtcgtccccgacgggctgtcgatcggcgcggacgaggcc
agagggctgatccgggtggccggccgggcgccgtcgggcgggcgctggcaggtcgtcgtc
gtggaggacgccgaccggatgaccgagtcggcgtccaacgccatcctcaagatgatcgag
gaaccgccgccgcggacggtgttcctgctgtgcgcccccagcctgcaccccgacgacgtg
ccggtcaccatccggtcccggtgccgggtgatcggcctgcgcaccccgccggtcggcgcg
atcgccgacgtcctggcccgccgcgacggcgtcgacccggcgctggccgcctggtcggcg
gccgcctccggcgggcacgtcggccgggcccggcggctcgcccgggacgaggaggcgcgg
ctcgcgcgcaaggcggtgctcgacgtcccgctgcggctggtctcgctcgccgcctgcctc
gacgccgccgatgacctggtggggtccgcgaaggaggagaccgacgccgccacggacgcc
ctcgacggctccgagaccgaggcgctgaagaccagcctgggcgtcggtgcccgcgggccc
ggcgtcgtcgcggccacccgcggcggggccggccagctcaaggagctcgagcgccggcag
aagtcccgggccacccgcatcggccgcgactccctcgaccgcgcgctggtcgacctcgcc
gggctctaccgcgacgccctggtgctcgacgcggcgcagtcgtcccccgaccaccccgcg
ccgacgctcaaccatcccgaccgccgggccgacgcggaggagctcgcccgccggatcggc
gcggagggggcgctgcgccgcatcgacgcgatcctcgcctgccgtcaggcgctggagcgc
aacgtgaagccgcaggtggcgctggaggccctcaccgtggcgctgcgactgcccgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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