KEGG   Bradymonas sediminis: DN745_17405
Entry
DN745_17405       CDS       T05497                                 
Name
(GenBank) hypothetical protein
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bsed  Bradymonas sediminis
Pathway
bsed03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bsed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DN745_17405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsed03021]
    DN745_17405
   03400 DNA repair and recombination proteins [BR:bsed03400]
    DN745_17405
Enzymes [BR:bsed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DN745_17405
Transcription machinery [BR:bsed03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DN745_17405
DNA repair and recombination proteins [BR:bsed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DN745_17405
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb2_6
Other DBs
NCBI-ProteinID: AWV91007
UniProt: A0A2Z4FPQ9
Position
4621172..4625698
AA seq 1508 aa
MRAINFPANQLAQLIALTDKLRNRPTFDETVALLRELFVDILRYGADDIDVARRVGLPPS
ARTRRIVSLAGAGGIRVCVLERERLSFYPNTYLKLFRLYPDCLVFVHSNEDQRVRVLVRP
RRSARHTYRYRSLTPRAVMGPRGDYLASWALRLGLLQPDISEPSHVNYAFFEKVLFGSPA
DLIALYDPFEWGNRAVWADALGMPAWENYLENVVHRFLQADRLPLERRAVGLHEALLRSF
PIYVEADTGQKLFYDHYRVQAPTEENDDVWRISLHLRLSLKIDGFTTQTPICLDFDFPRM
TRAGYLVWMGRRWKFQATAGLDISWNDGPPGEKTGGDDQDEEEDAQENDVLSQTLVEFGV
EELFKKETASQIEEEADATSLALDELDFDIDEADFGVQKLQFLAISRAFAYGVSSELRRL
RWHLRNRSRDDGCSVVTHVEHLVREWSVGCSRQAPRSLLPHLFVQDYFEPISQEGLKYSS
LGHHLNAHAVAWNAPEQPLWSCEVYAELNSHEVLPIAGAVLHPIRREFVAAPDAERICAA
AHYAALKVGRARSADALRYECMANRWTSKRTLVVPGDIAGAALRCGAFAGSPRQTLYSKM
RRHLSAAVEGITTHTDDEHALDAKSGFVRIGNPLRPGDLIARRFAGTAQIPLNPEEKLFN
AIVADDPKALLPTIWRDRSWWAPAGVAGVVRSVVFEGAAPASGVLSVQVEQNLALDIGGH
ITTDFGAMAPIVAHLRTEDAPFLADGEPVDMLITLPRAQFHTMRIAETDRPVVFDCQGEL
IAEAFVVQAHQFAISTLPKVYAQERSLCFNLRGRSLREQSGDRFSALTLAAQLNAFSACA
GLREFIKGLSPHRDPKVSHLQVVQRFEQLFAACGFDLRIRGDSASVTLRASRLTDGPILK
KPAETLHYRTQHPVEGGLFDPILFRPLPRAFLEAGGMNWVLEEPKRWVRNEQQIGTKYRD
GSMKGRGHLRLGERFEPGRGLGLIELPEPIVNPLLEQKLAEFLGLDLADLVAVSCGTLSL
TMDRDESGRLIWWVGDAPNCDGVLDLDFNEQSADTGVRAIEYLLEGLAEYDPKAVRFREA
IWHAVPVLPPHWRPIVDSNDDIPWAVSDLNILYSRVGHAAKRVATALKHSSVIPQAHLQS
TRRMLREHLHALYGVAEDAPSTRVAYRRHRWEERTHALRGIKQLLAQFRRECLLMSEPDA
LPFSIRGNWFRSKQIVGVSVAVDYLLECWHTSFAQQLFEAGRYPSPRAAHQALKRKDSDA
TTLCREILEEDNLFGYVLTEGGTLMSVRLAVVCDQVAIGVNDVLATRLGLSLYEDVLLYL
PPAPDAQVEARHLVANNAMAQSGQLWVEPAGDPAAPQHFWRLAQVETLAAVAASPVEVQL
DDFLSALCLGRVADDREEHALENAAHAEPSTVFIDEITPTDLSSEPSAQVHFPPVVEPVD
EATHLEPAEPSEAPKPQPIKDAYSDDATVHVGSLRDAWATLLKNTATHLSRSNSRPTEQG
EPATEEQF
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgcgcgcgatcaacttcccagccaaccaactcgcacagctaatcgcgctcaccgataaa
ctgcgcaaccggcctactttcgacgaaacggtggcgctactgcgagaactcttcgtcgac
atccttcgctacggcgccgatgatatcgatgtggcccggcgggtcggactccctccgagc
gcgcggactcggcgtatcgtgtcgctcgccggggcgggcggaatcagagtctgtgtcctg
gagcgcgaacgtctttccttttatcccaacacctatctaaagctatttcgcctttatccg
gattgcctggtttttgtacattccaacgaagatcagcgggttcgcgtgttggtgcgcccg
cggcgtagcgcccggcatacctatcgttatcgaagtctcactccacgcgccgtcatgggg
ccgcgtggagattatctggcctcctgggcgcttcggcttgggcttcttcagccggatatc
tcggagccatcacatgtaaattacgcatttttcgaaaaggtcttatttggctcaccggcg
gatctaatagcactttacgacccctttgaatggggtaatcgggcggtctgggccgacgcg
ctggggatgccggcatgggaaaattacctggaaaatgtggtccaccgctttcttcaggcc
gaccggctcccgcttgagcgccgcgcagtcgggctacatgaggcgttgctgcgttctttc
cccatttacgtcgaggcagacacaggccagaagctattctacgaccactatcgcgttcag
gcaccgaccgaggagaacgacgacgtctggcgcatctcgcttcatcttcgtctgagccta
aaaatagacgggttcacgacgcagacaccaatttgtctggacttcgacttcccccgcatg
acccgcgccggctacttggtttggatgggacgcaggtggaaatttcaggcaacggcaggt
ctggacatcagttggaatgacgggccacccggcgagaaaacaggcggtgatgatcaggac
gaggaggaagacgctcaggaaaatgacgttttgagccagactctggtggaatttggagtt
gaggagctgttcaaaaaggaaactgcatcccaaatcgaggaggaagcggacgcaacttca
ctcgcacttgatgagctagacttcgatatcgacgaggcggacttcggtgtgcaaaagttg
cagtttttggccatctctcgtgcctttgcctacggtgtatccagcgagttgcgccgcctt
cgctggcatcttcgaaatcgctcacgcgacgacggatgttcggtcgtcacgcatgtagag
cacctggtccgtgaatggagcgtcgggtgctcccgacaagcaccgcgctcattattgcca
catctcttcgtgcaggattattttgaaccgatatcccaggaagggctcaaatactcgtcg
cttggacaccatcttaatgcacatgccgtcgcttggaatgcccccgaacaacccttatgg
agttgcgaagtatatgccgagcttaactcgcacgaagtcctgcctattgcaggcgcagtt
ttacatccaatccggcgcgaatttgttgcagctcccgacgccgagagaatctgcgccgca
gcgcattacgcggcgttaaaggtgggccgagcccgcagtgccgacgcgcttcgctatgag
tgcatggcgaatcgctggacctccaagcgcacacttgtcgtccccggagatattgctgga
gctgcgctccgatgcggcgcatttgccggaagccctcgtcagactctctattcaaagatg
cggcgtcacctctccgctgcggttgaaggcatcaccactcataccgacgacgaacatgca
ctcgacgccaaatcgggttttgtgcgcatcggcaatccacttcgcccgggcgatcttatc
gctcgaagattcgctggtaccgcacagattccactcaaccccgaagagaaactcttcaac
gccattgtcgccgatgatccgaaggcgctcttacctacaatctggcgagatcgctcttgg
tgggcaccggccggtgtggcgggcgtggtgcgcagtgttgtgtttgagggagctgcgccc
gcctccggcgtcttgagtgttcaggtggagcaaaatcttgcgctggacataggcggtcac
attacgactgattttggagccatggcgcccattgtcgcgcacttgaggacggaagacgct
ccgtttctcgcggacggtgaacccgtcgatatgctcatcacgctcccacgagcgcaattt
cacaccatgcgcatcgccgaaactgaccggccggttgtctttgattgccagggagagctt
atcgcggaggcattcgtcgttcaagcgcatcaattcgctatttcgactctgccgaaggtg
tatgctcaggaaagatcgttgtgttttaatctccgaggacgctcgcttcgtgagcaaagc
ggagaccgcttctcggcgcttacgctcgccgcccagctcaacgccttctcggcgtgcgca
ggactgcgcgagtttatcaaagggttgagtccccatcgcgatccgaaggtatctcacctc
caggtggtccagcgattcgagcagttgttcgcggcctgcgggtttgatcttcgcatacgg
ggtgactcggcaagcgttacgctccgggcatctaggctaacggatggccctattctaaaa
aagccagcggagacactgcattatcgaacccagcacccggtcgagggtgggcttttcgat
ccgatattatttcgcccgttgccgagggcttttttggaagcaggcggaatgaattgggtg
ttggaagagccgaagaggtgggttcggaacgagcagcaaatcggcactaaatacagggac
gggagcatgaaagggcgcggtcatcttcgtttaggcgaacgctttgagcccggacgcggg
ctcgggcttatcgagttgcctgagccgatagtcaaccccttattggagcaaaagctcgcc
gaattcctagggttggacctcgcggatttggttgccgtgagctgcgggacactcagttta
acaatggatcgcgacgaatccgggcgtctcatctggtgggttggcgatgcccctaactgc
gacggagttctcgacctggatttcaatgagcagtccgccgacacaggcgtccgcgcgatc
gaatatctgttggaaggcttggccgaatacgacccgaaggcagtgcggttccgggaggcg
atatggcacgctgtaccggtattgcctccgcattggcgccccattgtcgacagcaatgac
gacattccatgggcagtgagcgacctaaacatactttatagcagggtcggacacgcagcg
aagcgtgtggcgacggcgctaaagcactcgagcgtgatcccccaggcccatcttcaatca
acacgtcgtatgctccgtgagcatctccatgcgctttatggtgttgctgaggatgcgcct
tctacccgggtcgcctatcggcgccatagatgggaggagcggacccacgcactgcgcggc
atcaagcaactgctcgctcagtttcgtcgagaatgcctgttgatgagtgagcctgatgcg
ctgcctttctctattcgtgggaactggttcaggagtaaacagatcgtcggggtgagtgtt
gcggtcgattatctgttggagtgttggcatacatcattcgcgcagcagctctttgaggcg
ggccgctatccgagcccgcgcgcggcccatcaggccctcaaacgtaaggattcagatgcc
acaacgttatgccgcgaaatcctcgaggaggacaatctcttcggttatgtgctcaccgag
gggggcacattaatgtctgttcgtttggccgttgtgtgtgaccaggtggccatcggtgtg
aacgatgtgctggcgacccgactcggactttcgctttacgaggatgtgctgctatatctt
ccgcccgctccagacgctcaggttgaggcgcgacatctcgttgcgaacaatgcgatggca
cagtccggtcagctatgggtcgagccggccggcgaccccgccgcgccgcaacacttctgg
cggctcgcccaggttgaaaccctcgccgccgtcgccgcatcccccgtcgaagttcagctt
gatgattttctcagcgcgctttgtcttgggcgagtcgctgacgacagggaagagcacgca
ttggaaaacgcggcgcacgccgagccctccacagtttttattgatgaaattacgcccacc
gatctgtcgtccgaaccgagtgcgcaggtacatttcccaccagtagtcgaaccggttgat
gaggcgacccatttagaacccgctgagccctccgaagcgccaaaaccgcagccgataaaa
gacgcgtattcagacgacgcgacggtgcatgttggttcgttgcgggacgcttgggcgaca
cttttgaaaaacaccgcaacccatctgagccgatcgaatagccgcccgaccgagcagggc
gagccggcaaccgaggaacaattttga

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