KEGG   Burkholderia seminalis: WJ12_03920
Entry
WJ12_03920        CDS       T04851                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
bsem  Burkholderia seminalis
Pathway
bsem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WJ12_03920 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsem03019]
    WJ12_03920 (groEL)
   03110 Chaperones and folding catalysts [BR:bsem03110]
    WJ12_03920 (groEL)
   03029 Mitochondrial biogenesis [BR:bsem03029]
    WJ12_03920 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bsem04147]
    WJ12_03920 (groEL)
Enzymes [BR:bsem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     WJ12_03920 (groEL)
Messenger RNA biogenesis [BR:bsem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     WJ12_03920 (groEL)
Chaperones and folding catalysts [BR:bsem03110]
 Heat shock proteins
  HSP60 / Chaperonin
   WJ12_03920 (groEL)
Mitochondrial biogenesis [BR:bsem03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    WJ12_03920 (groEL)
Exosome [BR:bsem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   WJ12_03920 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   WJ12_03920 (groEL)
  Exosomal proteins of breast cancer cells
   WJ12_03920 (groEL)
  Exosomal proteins of colorectal cancer cells
   WJ12_03920 (groEL)
  Exosomal proteins of bladder cancer cells
   WJ12_03920 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AOJ24041
Position
1:883933..885573
AA seq 546 aa
MAAKDVVFGDSARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAVDELKKISKPCTTNKEIAQVGSISANSDTSIGDRIAEAMDKVGKEGVITVEDG
KSLADELDVVEGMQFDRGYLSPYFINNPEKQVAVLDNPFVLLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDIEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
IAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQVRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARTAIAGLTGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNA
ATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG
GMGMDM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtcgtattcggcgattccgcccgttcgaagatggtcgaaggcgtg
aacattctcgccaacgcagtcaaggtcacgctgggtccgaagggccgcaacgtggtgctc
gagcgcagcttcggcggcccgacggtcaccaaggacggtgtgtcggtcgcgaaggaaatc
gagctgaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtcgcttccaag
accagcgacaacgcaggcgacggcacgacgacggcaaccgtcctcgcgcaatcgatcgtt
cgcgaaggcatgaagtacgtcgcatcgggcatgaacccgatggacctgaagcgcggtatc
gacaaggcagtcgcagcggctgtcgacgagctgaagaagatcagcaagccgtgcacgacg
aacaaggaaatcgcacaggtcggctcgatctcggcgaacagcgacacgtcgatcggcgat
cgcatcgctgaagcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaagacggc
aagtcgctggctgacgaactcgacgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccgtacttcatcaacaacccggaaaagcaagtcgccgtcctcgacaacccgttcgtg
ctgctgcacgacaagaaggtgtcgaacatccgtgatctgctgccggtgctcgagcaagtc
gcgaaggctggccgtccgctgctgatcatcgccgaagacatcgaaggtgaagcgctcgca
acgctggtcgtgaacaacatccgcggcatcctgaagaccgttgcggtcaaggcgcctggc
ttcggcgatcgtcgcaaggcgatgctggaagacatcgcgatcctgacgggcggccaggtg
atcgccgaagaaaccggcctgacgctcgagaaggcaacgctggcagaactgggccaggcg
aagcgcatcgaagtgggcaaggaaaacacgacgatcatcgacggcgcaggcgaagccgtg
aacatcgaagcacgcgtgaagcaagtgcgcgcgcaaatcgaagaagcgacgtcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgcagtgatcaag
gtcggtgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgtgtcgaagacgcactg
cacgcaacgcgcgcagctgtggaagaaggcatcgtggcaggtggcggcgttgcgctgatc
cgcgctcgcaccgcgatcgcaggcctgaccggcgcgaacgccgaccagaacgccggcatc
aagatcgtgctgcgcgcgatggaagagccgctgcgccagatcgtcacgaacggcggcgaa
gaagccagcgtcgtggtggcggccgttgctgcaggtacgggcaactacggctacaacgca
gcaacgggcgagtacgtcgacatggttgaagccggcgtcgtcgacccgaccaaggtcacg
cgcaccgcactgcagaacgcagcgtcggttgctggcctgctgctgacgacggacgcagct
gtcgcagaactgccgaaggaagacgcaccgatgccgggcggcatgccgggcggcatgggc
ggcatgggcatggacatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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