KEGG   Burkholderia seminalis: WJ12_07380
Entry
WJ12_07380        CDS       T04851                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
bsem  Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bsem03009]
    WJ12_07380
Enzymes [BR:bsem01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     WJ12_07380
Ribosome biogenesis [BR:bsem03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    WJ12_07380
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AOJ24675
Position
1:1625243..1626994
AA seq 583 aa
MTDIHDIESSAPAVQAARADDAPEQDASAGGDERPRRGLRRGPRSLIARRRAAAKSKGAE
GEQPGGEGADAQPAETAEAQPARAPRNKDGAAKGGRKPAGKREGAAKAGQGGQGRRGAPK
AEGGPVKAEGDASQDELFAYVTSPAFDADNSAGGSGVRAPMLRRGRNQPANKRVLSPDDD
APKLHKVLAEAGMGSRREMEELIVAGRVSVNGEPAHIGQRIMPTDQVRINGKPVKRKLPN
KPPRVLLYHKPTGEIVSHADPEGRPSVFDRLPPMKTAKWLAVGRLDFNTEGLLMLTTSGD
LANRFMHPRYSVEREYAVRVVGELAEGMRQKLLHGVELDDGPANFLRIRDGGGEGTNHWY
HVALAEGRNREVRRMFEAVGLMVSRLIRTRHGPIPLPRGLKRGRWEELDDAQVRKLMATV
GLKAPTEEKGKRGGAGQAERRQPDPMETSMGFISREPVLTTHGQLDQPRRGGGRRGVPGL
PGLSGYGSLPVSPSGYGNRTGGGRDGNRGGMGGRDGNRAGGRDVDGNRASYGAGPKREGA
GGKRGGGKGGGNRNPNGNRADGAGNGGGQRGGQRPQRSRTRSR
NT seq 1752 nt   +upstreamnt  +downstreamnt
ttgactgatatccacgatattgaatcgtccgcgcctgccgtgcaggcggcgcgcgccgac
gatgcgccggagcaggatgcttcggccggtggcgacgagcgtccccgccgcggtttgcgg
cgcggcccgcgcagcctgatcgcgcggcgtcgcgcggcagccaagtcgaagggcgccgaa
ggcgagcagccgggcggcgaaggcgcggatgcgcagccggccgagacggccgaagcgcag
ccggcgcgtgcgccgcgcaacaaggacggtgcggccaagggggggcgcaagccggccggc
aaacgcgaaggcgcggccaaggctggccagggcggtcagggccggcgcggtgcgccgaag
gctgagggcggcccggtgaaggcggagggcgatgcgtcccaggacgagctgttcgcctac
gtgacgtcgcccgcattcgacgcggacaactccgcgggcggcagcggcgtgcgtgcgccg
atgctgcgccgcggccggaaccagccggcgaacaagcgcgtgctgtcgccggacgacgac
gcgccgaagcttcacaaggtgctggcggaggcgggcatgggctcgcgccgcgaaatggaa
gaattgatcgtcgccggccgcgtgtcggtgaacggcgagcccgcgcacatcgggcagcgc
atcatgccgaccgaccaggtgcggatcaacggcaagccggtcaagcgcaagctgccgaac
aagccgccgcgcgtgctgctgtaccacaagccgacgggcgagatcgtcagccacgcggat
ccggaaggccgtccgtcggtgttcgatcgcctgccgccgatgaagacggcgaaatggctt
gcggtgggtcgcctcgacttcaataccgaaggtctgctgatgctgacgacttcgggcgat
ctcgcgaaccgcttcatgcacccgcgctacagcgtcgagcgcgagtatgcggtgcgcgtc
gtcggcgagctggccgaagggatgcggcagaagctgctgcacggcgtcgagctcgatgac
ggtccggcgaatttcctgcgtatccgcgacggcggcggcgaagggacgaaccactggtat
cacgtcgcgctggccgaaggccgcaaccgcgaagtgcgccggatgttcgaggccgtcggc
ctgatggtgagccgcctgatccgtacgcgtcacggcccgatcccgctgccgcgcggcctg
aagcgcggtcgttgggaagagctcgacgacgcgcaggtgcgcaagctgatggcgacggtc
ggcctgaaggcgccgaccgaggagaagggcaagcgcggcggggctggccaggccgaacgc
cgtcagcccgatccgatggagacgtcgatgggtttcatcagccgtgagccggtgctgacg
acgcatgggcaactcgaccagccgcgccgcggtggcggcaggcgcggcgtgccggggcta
cccggcctgagcggctacggcagtctgccggtttcgccgtcgggctacggtaatcgtacc
ggcggtggccgtgacggcaaccgtggtggcatgggcggtcgcgacggcaaccgagccggc
ggccgcgatgtcgacggcaatcgcgcgtcgtacggcgcgggccccaagcgcgaaggcgcg
ggcggcaagcgcggcggcggcaagggcggcggtaatcgcaatccgaacggcaatcgggcg
gatggcgccggcaacggcggtggtcagcgcggcggccagcgtccgcagcgcagccgtacg
cgcagccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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