KEGG   Bacillus subtilis subsp. subtilis 6051-HGW: BSU6051_01070
Entry
BSU6051_01070     CDS       T02503                                 
Symbol
rpoB
Name
(GenBank) RNA polymerase beta subunit RpoB
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bsh  Bacillus subtilis subsp. subtilis 6051-HGW
Pathway
bsh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bsh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BSU6051_01070 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsh03021]
    BSU6051_01070 (rpoB)
   03400 DNA repair and recombination proteins [BR:bsh03400]
    BSU6051_01070 (rpoB)
Enzymes [BR:bsh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BSU6051_01070 (rpoB)
Transcription machinery [BR:bsh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BSU6051_01070 (rpoB)
DNA repair and recombination proteins [BR:bsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BSU6051_01070 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AGG59450
Position
121919..125500
AA seq 1193 aa
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQV
INVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN
TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE
NT seq 3582 nt   +upstreamnt  +downstreamnt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcaccaattgaggatttcactggt
aacctctctcttgagttcattgattatagtttaggtgagcctaaatatcctgtagaggaa
tcaaaagaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggtgatttccctattatgaca
gatacaggtacttttatcattaacggtgcggaacgtgttatcgtttcccagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgca
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtccgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggctccgatcaagagattcttgatctcataggagaaaacgaatacctgcgaaatacg
cttgataaagataacacagaaaacagcgacaaagcgttgctggaaatttacgagcgtctc
cgtcctggagagccgcctacagtagaaaatgcgaaaagcttgcttgattctcgtttcttt
gatccgaaacgatacgatcttgccaatgtaggacgctataaaattaataaaaaacttcat
attaagaatcgcctcttcaatcagagacttgctgaaacgcttgttgatcctgaaacagga
gaaatccttgctgaaaaaggccagattcttgatagaagaacgcttgataaagtactgcca
tacttagaaaacggaatcggttttagaaagctgtatccgaatggcggcgttgttgaagat
gaagtgactcttcaatcaattaaaatctttgctccgactgatcaagaaggagaacaggtt
atcaatgtaatcggcaatgcttacatcgaagaagagattaaaaacatcacgcctgctgat
attatttcttcaatcagctacttcttcaacctgctgcacggagtaggcgacacagatgat
atcgatcatcttggaaaccgccgtttacgttctgtaggcgagcttctccagaaccaattc
cgtatcggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacg
aatacaattacgcctcagcagctgatcaatattcgtcctgttattgcgtccattaaagag
ttctttggaagctcacagctttctcaattcatggatcagacgaacccgcttgctgaatta
acgcacaagcgtcgtctgtcagcattaggaccgggcggattgacacgtgagcgtgccgga
atggaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcct
gagggcccgaacatcggtttgatcaactcactatcatcttatgcaaaagtaaaccgtttt
ggctttattgaaacgccatatcgccgcgttgaccctgaaacagggaaggtaacgggcaga
atcgattacttaactgctgatgaagaggataactatgttgtcgctcaagcgaatgctcgt
cttgatgacgaaggcgcctttattgatgacagcatcgtagctcgtttccgcggggagaac
accgttgtttccagaaatcgtgtagactacatggatgtatcgcctaagcaggttgtatct
gctgcgacagcatgtatcccgttcttagaaaacgatgactccaaccgtgccctcatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagccggaagcgccatttgttggaact
ggtatggaatacgtatcaggaaaagactctggtgccgctgttatttgtaaacaccctggt
atcgttgaacgcgtagaagccaaaaacgtttgggttcgccgttatgaagaagtagacggt
caaaaagtaaaaggaaacctggataaatacagcctgctgaaatttgtccgctctaaccaa
ggtacgtgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaa
atccttgctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatg
gtcggcttcatgacgtgggatggctacaactatgaggatgccatcatcatgagtgaacgc
ctagtgaaggatgatgtttatacatctatccacattgaagaatacgaatcagaagcacgt
gatacgaaacttggacctgaagaaatcactcgcgatattccaaacgtcggtgaagatgcg
cttcgcaatcttgatgaccgcggaatcatccgtattggggcagaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaaaggcgtaactgaactgactgccgaagaacgcctt
cttcacgccatctttggcgagaaagcccgcgaggttcgtgatacttctcttcgtgtgcct
catggcggcggcggaattatccatgacgttaaagtcttcaaccgtgaagacggagacgaa
cttcctccaggtgttaaccagttagtacgcgtatatatcgttcagaaacgtaagatttct
gaaggggataaaatggccggtcgtcacggtaacaaaggtgttatctctaagattcttcct
gaagaggatatgccttaccttcctgacggcacaccaattgatatcatgcttaacccgctg
ggcgtaccatcacgtatgaacatcgggcaggtattggaacttcacatgggtatggccgct
cgttaccttggcattcacattgcatctcctgtatttgacggagcgcgagaagaggatgtc
tgggaaacacttgaagaagccggcatgtctcgtgacgccaaaacagtgctttacgacgga
cgtactggagagccgtttgataaccgtgtatctgtcggtatcatgtacatgatcaaactg
gctcacatggttgacgataaacttcatgcacgctctacaggcccttactcacttgttacg
cagcagcctcttggcggtaaagcgcaatttggcggacagcgttttggtgagatggaggtt
tgggcacttgaagcttacggtgcggcttacactcttcaagaaattctgactgttaagtct
gatgacgtggttggacgtgtgaaaacatacgaagccatcgttaaaggcgacaatgttcct
gaaccaggtgttccggaatcattcaaagtattaatcaaagaacttcaaagcttaggtatg
gatgtcaaaatcctttctggtgatgaagaagaaatagaaatgagagatttagaagacgaa
gaagatgcgaaacaagctgacggcctggcattatcaggtgatgaagagccggaagaaaca
gcatctgcagacgttgaacgcgatgtagtaacaaaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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