KEGG   Peribacillus simplex: UP17_17390
Entry
UP17_17390        CDS       T04304                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsj  Peribacillus simplex
Pathway
bsj03410  Base excision repair
bsj03430  Mismatch repair
bsj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UP17_17390
   03430 Mismatch repair
    UP17_17390
   03440 Homologous recombination
    UP17_17390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsj03400]
    UP17_17390
DNA repair and recombination proteins [BR:bsj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     UP17_17390
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UP17_17390
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UP17_17390
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AMM94033
UniProt: A0A9W3WMI8
Position
complement(3734046..3736421)
AA seq 791 aa
MLKPKTRWNLRTADENKVAVLAEELHITPLVAALLVNRGLDTIESARSFLFVKNQTFHDP
FLLKDMDKAVYRIREAIQNGEKIRIFGDYDADGVTSTTVMMTALTRLGADVDFYIPNRFT
EGYGPNPMAFRLAAEQGVKVLITVDTGISAVDEAKLACELGMDYILTDHHEPGPELPEAL
AIIHPKLEDSSYPFEDLAGVGVAFKLAHALLGELPEDLLEIAAIGTIADLVPLKGENRLI
AAKGIEQLRLTGRPGLVALMKVANVQQEALNEESIGFAMAPRINAVGRLGDADPAVDLLM
SENLAEAMELANEINDINKERQAMVAAMAEEAIQEVEENFPPESNGVLIIGREGWNAGVV
GIVASKLVERFYRPTIVLSYDREKGHAKGSARSIAGFDLFESLSTCRELLPHFGGHPMAA
GMTLKIEDVQELRDRMNLIAKEQLSEEDFTPITNLDGATTLAEVSVQTIQEMSLLAPFGV
TNPKPKILIDSVQLSSVRKIGANQNHLKVQLEDGENHKLDGVGFGLGHFVDEIAPHAEVS
VIGELSINEWNNMKKPQIFVQDVSVNHWQLFDYRGKGQAEKWLADIPAQNRKIVIFSEDI
YSRYPFLQNQSDLVHIKNGQDADQLDCFEGHVVFMDMPPLREYLKRVIANKNPSRIYAHL
SHEQDHFLSTMPTRDHFKWFYAFLAKKGPLDVKRYGDDLAKYRGWSRDTVDFISKVFFEL
GFVTIENGLIMLTTNAKKRDLSESESYIRKKEQFELEQELVYSSYQQLFDWFNHYLVHEA
TDLEEETKQWI
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgttaaaaccaaaaacccggtggaacttgcgaactgccgatgaaaacaaagttgctgta
ctagctgaagagcttcatatcacacctttggttgcagccctgcttgtgaatcgaggcctg
gacacgattgaaagtgcccgatcatttttatttgtaaaaaatcaaacttttcatgatcca
tttttattgaaagatatggataaagcagtctatagaataagagaagccattcaaaatgga
gaaaaaatacggattttcggtgattatgacgcagatggcgtgacatcgaccacagtgatg
atgacggcgctaacgagattgggggccgatgtggatttttatatcccgaatcggtttaca
gagggctacggtccgaatccgatggcgttccgcctcgcagctgagcaaggggtgaaggta
ttaataaccgtcgataccggaatttctgcagtcgatgaagcgaaacttgcctgcgagctt
ggcatggattatattttgaccgatcaccatgaaccgggaccggaattgcctgaggcattg
gcgattatccatcctaaacttgaggacagttcctacccatttgaagatcttgccggagta
ggtgtcgcttttaagctggcacacgctttgctaggggaattgcctgaggatttacttgaa
atagcggccatcggcaccattgcggatttagtgcctttaaaaggggagaaccgcctcatc
gctgcgaaagggatcgagcagttacgattgactggccgtccggggcttgttgctctaatg
aaagtggcgaatgttcagcaggaagcattgaatgaagaatcaatcggttttgcgatggca
ccgcggatcaatgctgtcggacgacttggagatgctgacccggctgtggatttattgatg
tctgaaaacttggcagaagcgatggaacttgccaatgaaatcaatgatattaataaagag
cgtcaggcgatggttgcggcaatggcggaagaagcgattcaagaggttgaggaaaacttc
ccgcctgagtccaatggtgtacttatcatcgggagagaaggctggaacgcaggggtagtg
ggtattgtagcctccaaactggttgaacgcttttaccgccccacgattgtattaagttat
gaccgggaaaaggggcacgcgaaaggttctgcccggagcatcgccggtttcgatcttttt
gaaagtctttccacctgccgtgaattactgcctcattttggtggacatccgatggctgct
ggaatgacattgaaaatagaagatgttcaggagcttagggaccgcatgaacctgattgcg
aaggaacagctcagcgaagaggacttcacaccaattaccaacttggatggagcaaccact
ctagcggaagtttccgttcaaacgattcaggaaatgagcttgctggcgccatttggggtt
acgaatccaaagccgaagattttgatagattccgtacagctttcaagtgtccgaaaaatc
ggtgccaaccaaaatcacttgaaagtgcagcttgaagatggggaaaatcataaacttgat
ggagtgggcttcggtctaggtcattttgtggatgaaatagctccgcacgctgaagtctcg
gtgattggagagctttccatcaatgagtggaataatatgaaaaagccccagatctttgtc
caggatgtctcggtaaaccattggcagttattcgattaccgcggtaagggtcaggcagag
aagtggcttgccgacattccggcacaaaaccggaagatcgtcattttctcggaagatatt
tatagtagatatccatttttacaaaaccaatccgatctcgttcatatcaagaatggacag
gatgcagatcagctcgactgcttcgaaggccatgtggtatttatggacatgccgccgtta
agggaatatttgaaacgggtgattgccaataagaatccatcgcgtatctatgcacacctt
tcccatgagcaggaccatttcttaagtacgatgccaacaagggaccattttaaatggttt
tatgccttcctcgccaaaaagggcccgctcgatgtgaaaagatatggtgatgaccttgcc
aagtaccgcgggtggtcaagagataccgtggatttcatttctaaggtgttttttgagctt
ggttttgttacaatagagaatgggttaatcatgctcacaaccaatgcgaaaaaacgcgat
ctcagtgaatctgaatcgtatataagaaagaaagagcaatttgagcttgaacaagagctt
gtttattcttcctatcagcaattattcgattggttcaatcattatttagttcatgaggca
acagaccttgaggaggaaacaaagcaatggatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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