KEGG   Bacillus subtilis subsp. natto BEST195: BSNT_09861
Entry
BSNT_09861        CDS       T02607                                 
Symbol
yvgS
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bso  Bacillus subtilis subsp. natto BEST195
Pathway
bso03420  Nucleotide excision repair
bso03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BSNT_09861 (yvgS)
   03430 Mismatch repair
    BSNT_09861 (yvgS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bso03400]
    BSNT_09861 (yvgS)
Enzymes [BR:bso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSNT_09861 (yvgS)
DNA repair and recombination proteins [BR:bso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSNT_09861 (yvgS)
   MMR (mismatch excision repair)
    Other MMR factors
     BSNT_09861 (yvgS)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 UvrD_C AAA_19 AAA_30 SLFN-g3_helicase Viral_helicase1 PhoH AAA_16 DEAD ResIII NACHT nSTAND3
Other DBs
NCBI-ProteinID: BAI86915
UniProt: D4G1D4
Position
complement(3224938..3227295)
AA seq 785 aa
MFVNYFLEVPFMNQQDKEWKEEQSRIDEVLQELEKKERFLETSAGGLKHDIIGLRKSFWE
DVKVNFDDAHEAIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIEN
GEEQAERIYIGLASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLK
RQFMIKNGTLKAMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKIL
IVQGAAGSGKTSAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENME
QATFQEYIEHRLGRRFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYV
TRLSSDGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKK
ERRKDWVVHEAELLDKEDYLDVCKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLK
QAVRLLAFLDVTQLYLQLFSGWGGKFQHEKMAAIGELTRSAFTDNKLLYEDAAPFLYMQD
LIEGRKKNTKIKHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTIHGDQRM
DACFEDDPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPLVVKTEGHESLC
QKLAQEIGRLKKKGHETIAVICKTAQQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPV
YLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHL
YQMAE
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgtttgtcaactattttctggaggtgccgttcatgaatcagcaggataaggaatggaag
gaagagcagtcgagaatagatgaggtgctgcaggagctcgaaaaaaaagagcggtttctg
gaaacgtctgcgggcgggttgaagcatgatatcatcggattaagaaaaagcttttgggag
gatgttaaggttaattttgatgatgcccatgaagcgattgaaacgatggcaagcattaag
cagcaggcagagctgctgtctgatcgggaacacaatcatcggcgcatggatcagcagctc
aaacgaattcatcaattaaaaaaatcgccttatttcggccggattgattttattgaaaac
ggcgaggagcaggcagagcgaatttatatcggtttagcttcctgtttggatgagaaggag
gaacactttctgatttatgactggagggcgccgatatcaagtttgtactacaattattcc
ccaggaaaagcggagtacgaggtgcccggtgaaacgatagaaggggaaatggtgctgaaa
cgccagtttatgatcaaaaacggcactctcaaggcgatgtttaataccgatatgacgatt
ggtgatgaaatgctgcaagaggtattaagccatcactccgatacccaaatgaaaaacatc
gtgtctacgattcagaaagaacaaaatcagattatccgtaatgaaaaaagcaagatcctg
atcgtgcagggagcggctggcagcgggaaaacatcggctgcgcttcagcgtgtcgcttat
ttgttatacaggcaccgtggcgtcattgatgccggacaaatcgttttgttttctcccaac
ttcttatttaacagctatgtctcctctgttttgccggagttaggagaagagaatatggag
caggcgacgtttcaggaatatatcgagcatcgtcttggccgcaggttcaaatgtgaaagc
ccctttgatcagctcgaatattgcctgaccgaaacaaagggaggcgattttccaacaagg
cttgcgggaatcacatggaaggcgggtttatcctttcagcaattcattaatgaatacgtc
acacggctttcctctgacgggatgatttttaaaaatattatattccgcggacaaaagctg
atcacaaaggagcaaattcaatcctatttttactcattggatcaaaatcactccattccg
aatcggatggagcaaaccgcgaagtggctgctgagtgagcttaacaagcttgagaaaaag
gaacggcgaaaggattgggtcgttcatgaagctgagctgcttgacaaagaggactacttg
gacgtgtgcaaaaaactgcaagaaaggaaacgattcagcgagagtacgtttaacgattat
caaagagagcagcagctgcttgccgccatcattgtgaaaaaagctttcaaaccgctcaag
caggcggtcaggctccttgcatttcttgatgttacacagctgtatttgcaattgttttct
ggctggggaggaaaatttcagcatgagaagatggccgcgataggtgagctgacccgttcg
gcatttacggataataaattgctctatgaggacgcggcaccgtttctttatatgcaggat
ctgattgagggcagaaagaaaaatacgaagatcaaacatctatttattgacgaagcccag
gactattcaccgtttcagatggcttacatgagaagcatttttccggctgccagcatgaca
gtgctcggtgatatcaatcagtccatctacgcgcataccatacacggggatcagcgtatg
gatgcgtgctttgaggatgatcctgctgagtatgttcgtttaaagagaacatacagatca
acaaggcagattgtcgagtttaccaaagcgatgcttcaagatggagcggatattgagccg
tttaatagaagcggggaaatgccgctcgttgttaaaactgaaggacatgagagcctttgc
caaaagctcgcgcaagaaattggccggctcaagaaaaaagggcacgaaacaatagccgtc
atctgcaagactgcgcagcaatgcatacaggcgcacgcccacatgagtgaatatacagat
gttcgcctgattcataaagaaaatcaaccatttcaaaagggtgtttgcgtgattccggtg
tatttagcgaagggaattgaatttgacgcagtgcttgtctatgatgcatctgaagaacac
tatcatacagagcacgaccgcaggcttttatatactgcgtgcacccgtgcgatgcacatg
ctggcggtattttatacaggtgaagccagtccgtttgtaaccgctgtgccgcctcactta
tatcagatggctgaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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