KEGG   Baekduia soli: FSW04_09370
Entry
FSW04_09370       CDS       T06127                                 
Name
(GenBank) RNB domain-containing ribonuclease
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bsol  Baekduia soli
Pathway
bsol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FSW04_09370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsol03019]
    FSW04_09370
   03016 Transfer RNA biogenesis [BR:bsol03016]
    FSW04_09370
Enzymes [BR:bsol01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     FSW04_09370
Messenger RNA biogenesis [BR:bsol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FSW04_09370
Transfer RNA biogenesis [BR:bsol03016]
 Prokaryotic type
  tRNA degradation factors
   FSW04_09370
SSDB
Motif
Pfam: RNB S1 CSD2
Other DBs
NCBI-ProteinID: QEC47761
UniProt: A0A5B8U488
Position
2009183..2010937
AA seq 584 aa
MSRARTVGSSLTAEAFTVGVLAKRGRFAVLEPFFERRPGGRRPIVDPGRNARPGQLVLVR
TGGRVKGHAKVVRVIGRPDVARDVLEALMLDRGLRRSFPAGVDTAAREAVQAVDDTVARR
DLRDLPTFTIDPSTAKDFDDAISAEELGDAHWRVWVHIADVSAYVRPGSPVDREAYRRGT
SVYVPGAVEPMLPDVLSNGACSLVPGEDRLAVTVELELAGAAVTRAAFFRSRIRSDARLD
YEQVDRIFAGTERAQEPWALPLAAARGASAALRERREALGALAVESAEPAFALDAQGHMV
GAERQEQTESHTLIEHLMIAANEAVARLLSDRGIPTLYRIHERPEPVAAERLLEQLESLG
VPTPPAPEHIGPREAGEIIAAASVLVAAEVRRRGGAGRLGLTSLVLRSLKQARYAPENKG
HAGLHSEAYCHFTSPIRRYPDLVCHRALLSAVGGGEEAPRATRLDEAAEWTSGRERDAMS
IERAADDVAQAFLLERGLFDGSIDRDQEGEVVGLIGAGVFVAFGDGFEGFLPVRRLRGDW
WELNEAGTQLQGEESGRTIRIGDALAVHVRSVDAPRGRVELDIA
NT seq 1755 nt   +upstreamnt  +downstreamnt
gtgagccgggcgcgcaccgtcggcagcagcctgaccgcggaggcgttcaccgtcggtgtc
ctggccaagcgcggccgcttcgccgtgctcgagccgttcttcgagcgccgccccggcggc
cgccggcccatcgtcgacccggggcgcaacgcgcggccgggccagctcgtgctcgtccgc
acgggcggccgggtcaagggccacgccaaggtcgtgcgcgtcatcgggcgccccgacgtc
gcgcgcgacgtgctcgaggccctcatgctggaccgcgggctgcgccggtcgttcccggcc
ggcgtcgacacggccgcgcgcgaggcggtgcaggccgtcgacgacaccgtcgcgcgccgc
gacctgcgcgacctgccgacgttcacgatcgacccgtccacggccaaggacttcgacgac
gcgatcagcgccgaggagctcggcgacgcgcactggcgtgtgtgggtgcacatcgccgac
gtcagcgcctacgtgcggccgggctcgcccgtcgaccgcgaggcctaccgccggggcacg
tcggtgtacgtgcccggcgcggtggagcccatgctgcccgacgtgctctccaacggcgcc
tgctcgctcgtgcccggcgaggatcggctggccgtcaccgtcgagctcgagctggcgggc
gccgccgtcacgcgcgcggcgttcttccgctcgcggatccgctccgacgcgcgcctggac
tacgagcaggtcgaccggatcttcgccggcaccgaacgcgcgcaggagccctgggccctg
ccgctggcggccgcgcgaggggcgagcgccgcgctgcgcgagcgccgcgaggcccttggc
gccctggccgtcgagagcgccgagccggcgttcgccctcgacgcccagggccacatggtc
ggggccgagcgccaggagcagacggagtcccacacgctcatcgagcacctgatgatcgcc
gccaacgaggcggtcgcccggctgctgtccgaccgcgggatcccgacgctgtaccggatc
cacgagcggcccgagcccgtggccgccgagcggctgctcgagcagctcgagagcctcggc
gtcccgacgccgcccgcgcccgagcacatcgggccgcgcgaggcgggggagatcatcgcc
gccgcgtcggtgctcgtggccgccgaggtgcgccgccgcggcggcgccgggcgcctcggc
ctcacgtcgctcgtcctgcgctcgctcaagcaggcccgctacgcgccggagaacaagggc
cacgccggcctgcactccgaggcctactgccacttcacctcgcccatccggcgctacccc
gacctcgtgtgccaccgcgcgctgctgtcggccgtcggcggcggggaggaggctccgcgc
gccacgcgcctggacgaggccgccgagtggacctcggggcgcgagcgcgacgcgatgagc
atcgagcgcgccgccgacgacgtcgcccaggccttcctgctcgagcgcggcctgttcgac
ggctccatcgaccgcgaccaggagggcgaggtcgtcggcctcatcggcgccggcgtgttc
gtcgccttcggcgacggcttcgagggcttcctgcccgtgcggcgcctgcgcggcgactgg
tgggagctcaacgaggccgggacgcagctgcagggcgaggagtccgggcgcacgatccgc
atcggcgacgcgctggccgtgcacgtgcgctccgtcgacgcgccccgcgggcgggtcgag
ctcgacatcgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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