KEGG T02292: B657

Bacillus subtilis QB928: B657_01800

Entry

B657_01800        CDS       T02292

Symbol

alkA

Name

(GenBank) DNA-3-methyladenine glycosylase

K01247

DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

bsq Bacillus subtilis QB928

Pathway

bsq03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:bsq00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B657_01800 (alkA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsq03400]
    B657_01800 (alkA)
Enzymes [BR:bsq01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     B657_01800 (alkA)
DNA repair and recombination proteins [BR:bsq03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     B657_01800 (alkA)

SSDB

Motif

Pfam:

OGG_N HhH-GPD AlkA_N

Other DBs

NCBI-ProteinID:

AFQ56116

Position

complement(202559..203470)

AA seq 303 aa
MTWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIGEIRSLVQVSV
INNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLTPFYEMAKADPLLKMPARKFY
GLRVIGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEAFGDSIEWNGKKYWVFPPYERIA
RLTPTDLADIKMTVKKSEYIIGIARLMASGELSREKLMKMNFKDAEKNLIKIRGIGPWTA
NYVLMRCLRFPTAFPIDDVGLIHSIKILRNMNRKPTKDEILEISVPWKEWQSYATFYLWR
VLY

NT seq 912 nt +upstreamnt +downstreamnt
gtgacatggcatgaagtcaatgatgttattgtcattacattacctgaaattttcgacatg
aatgcgaaccttggctacctaaccagggaaaaaaatgaatgcatgtatgaaatagagaac
aatatcattacaaaagttatagccattggggaaattcggtccttagtgcaggtaagcgta
atcaataataaacaaatgattgttcaattcctaaacgattctagacctgttgagcagtgg
aaacgggaagagattgtaaaatatattcatgaatggtttgatcttgataacgatttaact
ccattttatgaaatggcaaaagcagatccattacttaaaatgcctgcccgaaaattttat
gggttgcgagtgatcggcattcccgatttatttgaagctttatgttggggagttttaggg
caacaaattaacttagccttcgcgtactccttaaagaagcaatttgtagaagcatttggc
gattctattgaatggaatggtaaaaagtattgggtgttcccaccgtacgagcgaattgca
cggttaacccctaccgacctggcagatattaaaatgacggtgaaaaaaagtgaatatatc
attggaatagccagattaatggcaagtggagaattatcgagggaaaaattaatgaaaatg
aactttaaagatgctgaaaaaaacttaattaaaatacgaggaatcggtccttggacagcc
aattatgttctaatgcgctgccttaggttcccgacagcttttccaatcgatgatgtgggt
cttattcattcgataaaaatattacgtaatatgaaccgaaagcctacgaaagatgaaatc
ttagaaatatcggttccatggaaagaatggcaatcatacgctaccttttatttatggcgt
gtcctttactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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