KEGG   Bacillus subtilis QB928: B657_16580
Entry
B657_16580        CDS       T02292                                 
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
bsq  Bacillus subtilis QB928
Pathway
bsq03030  DNA replication
bsq03430  Mismatch repair
bsq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B657_16580 (polC)
   03430 Mismatch repair
    B657_16580 (polC)
   03440 Homologous recombination
    B657_16580 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsq03032]
    B657_16580 (polC)
   03400 DNA repair and recombination proteins [BR:bsq03400]
    B657_16580 (polC)
Enzymes [BR:bsq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B657_16580 (polC)
DNA replication proteins [BR:bsq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B657_16580 (polC)
DNA repair and recombination proteins [BR:bsq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B657_16580 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 RNase_H_2 DEDDh_C Zn-ribbon_8 DZR
Other DBs
NCBI-ProteinID: AFQ57595
Position
1706632..1710945
AA seq 1437 aa
MEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKASKSWHFHFQFKSLLPFQI
YDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAEYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATIIELTGITDDML
QDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLEVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLELELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDNNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMED
INAKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq 4314 nt   +upstreamnt  +downstreamnt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaacatggcgagattaaaaagctgacaattcac
aaagcttctaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacacattaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatct
tcaattgaagttcaggatgccgaggtcagtgaaagtatcgttcaagactactggtcacgc
tgcattgaagaactgcagggcatttcgccgccgattatcagtcttttaaaccagcaaaaa
ccgaagctgaagggcaataaactgattgtcaaaaccaaaacagatacagaagcggctgcg
ctaaagaacaaatacagttccatgattcaagcagaataccgtcaatttggctttccggat
cttcagcttgatgctgaaatatttgtatccgagcaagaagttcaaaagtttcgggagcaa
aagcttgcggaagaccaagagcgggctatgcaggccttgattgaaatggagaagaaagat
aaagaaagtgatgaagaccaagcaccatctggtcctcttgttatcggttatcaaattaaa
gataacgaggaaatccgaacacttgacagcatcatggacgaagaacggagaattacggtc
caaggttatgtgtttgatgtggagacgcgcgagctgaagagcgggcgcacgctgtgtatc
ttcaaaattacagactatacaaatagtattttgatcaaaatgtttgcacgtgaaaaagaa
gatgcggcgctgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcatt
caaaatgatacatttgtcagagaccttgtcatgatcgcaaatgacgtaaacgaaataaaa
gcaaaaacccgtgaagattcagcacctgaaggagaaaaaagagtggaattgcatcttcat
tccccaatgagccaaatggatgctgttacgggtatcggaaagcttgtcgaacaggcgaaa
aaatgggggcatgaggccatcgctttgaccgaccatgctgtcgttcaatccttccctgat
gcgtattctgcggccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctc
gtggatgatggcgtgccaattgcttataatgccgcacatcgtctgctcgaagaagaaaca
tatgttgtttttgacgttgagacgacaggattgtctgctgtatacgataccattattgag
ctggctgcagtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaac
ccgcatcgtccgctttccgccacaatcatagagctgacagggatcacagatgatatgcta
caagacgctccggatgtcgtagatgtaataagagatttcagagaatggattggcgatgat
attcttgtcgctcataatgcaagctttgatatgggattcttaaatgtagcctataaaaaa
cttcttgaagtcgaaaaagctaaaaacccagtcattgatacgcttgaacttggacgtttt
ctctatccggaatttaagaaccaccggttgaacacactttgtaaaaagtttgatatcgag
ctcacacagcatcaccgtgcgatctatgatactgaggcaaccgcttatttgcttctgaaa
atgctgaaagacgcagctgaaaaaggtattcagtaccatgatgagttgaatgaaaatatg
ggtcagtccaatgcttatcaaagatcaagaccgtatcatgcaacattacttgccgtgaac
agcacgggacttaaaaatttatttaagcttgtgtcactttctcatattcattatttttac
agagtgccgcgtattccgagatctcagcttgagaaatacagggaagggcttctgatcggt
tctgcttgtgacaggggagaggtttttgagggaatgatgcaaaaatcgcctgaagaggtg
gaagatatcgcgtcattctatgattaccttgaggttcagccgcctgaagtgtatcgtcac
ttgctggagcttgaactggtccgtgatgaaaaagcgctgaaagaaattattgcgaatatc
acgaagctgggggaaaagcttaataaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatctacagaaagattttaatatcctcacaaggcggggcaaatccg
ctgaataggcatgaactgccgaaagtgcatttcagaacgacagacgaaatgcttgaagct
ttttctttcttaggtgaagaaaaagcgaaggagatcgtagtcaccaatacccaaaaggtt
gcttctttagttgatgacatcaagccgattaaagatgatttatatacgccgaaaatcgaa
ggcgctgatgaagagatcagagaaatgagctatcagcgtgcaagaagcatttacggggaa
gagctgcctgaaattgtcgaagcgcggattgaaaaagagttaaagagtattattggccac
ggatttgctgttatttacttgatctctcacaaacttgtaaaacgttcactagatgacggg
tatctcgttggttcccgtggttccgtaggatcttcattagttgcgacacttactgagatt
actgaggtaaacccgctgccgccgcactatgtttgtcctgagtgccagcattctgagttc
tttaatgacggttctgtcggttctggttttgacctgcctgacaagacatgccctcattgc
ggaacgcctttgaaaaaagacggccatgatattccatttgaaacgttcttaggatttaaa
ggggacaaagtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacac
aattacacaaaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcacg
gtggcagaaaaaacagcctacggttatgtaaaaggctatgccggagacaacaatcttcat
atgcgcggtgccgaaatagatcggctcgtacagggatgcacaggtgtaaaacgtacaact
ggacagcaccctggcggtattatcgtagttccggattatatggatatttatgatttttca
ccgatccagttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttc
cactccatccatgacaacctgttaaaacttgatattctcggacacgatgacccgactgtt
attcggatgcttcaagacttaagcggaatagatccgaaaacaattccgacggatgatcct
gaagtgatgaagatcttccagggaaccgaatcactcggtgtgactgaagaacagattggc
tgtaaaacgggcactcttggaattcctgaattcggaacccgatttgtccggcagatgctt
gaagatacaaagccgaccactttttctgagctcgttcagatttcaggcttgtctcacgga
actgatgtatggcttggcaatgcacaggagctcatccacaataatatttgtgagctgagt
gaggttatcggctgccgtgatgacattatggtttatttaatctatcaaggccttgagccg
tcccttgcctttaaaatcatggaattcgtgcgtaaaggaaaaggattaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatattgattcctgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcatatgtcttaatggcagtccgcattgct
tactttaaagtgcatcatgctcttttgtattatgcggcttattttaccgttcgtgcagat
gactttgatattgatacaatgatcaagggctctacagcaatcagagcggtaatggaggat
ataaacgctaaaggacttgatgcttcaccgaaggaaaagaaccttctgactgttttagaa
ttagcgcttgagatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctcc
agcgccacagagtttattattgacggcaacagtcttattccgccgtttaactctattcca
gggttagggacgaacgctgctttgaacattgtaaaagctcgcgaagaaggcgaattcctc
tcaaaagaagatttgcaaaagagagggaaagtatcaaaaacgattttagagtacttagat
cgccatggctgtctggagtcactgcctgatcaaaaccaattgtcactgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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