KEGG T01837: I33

Bacillus subtilis subsp. subtilis RO-NN-1: I33_1047

Entry

I33_1047          CDS       T01837

Name

(GenBank) pseudouridine synthase YjbO

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

bsr Bacillus subtilis subsp. subtilis RO-NN-1

Brite

KEGG Orthology (KO) [BR:bsr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bsr03009]
    I33_1047
Enzymes [BR:bsr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     I33_1047
Ribosome biogenesis [BR:bsr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    I33_1047

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 DUF1347

Other DBs

NCBI-ProteinID:

AEP90018

Position

complement(973334..974242)

AA seq 302 aa
MNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHESVLNNMIVKK
GDRVFIDLQESEASSVIPEYGELDILYEDNHMLIVNKPAGIATHPNEDGQTGTLANLIAY
HYQINGETCKVRHVHRLDQDTSGAIVFAKHRLAHAILDQQLEKKTLKRTYTAIAEGKLRT
KKGTINSPIGRDRSHPTRRRVSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRV
HLASLGHPLTGDSLYGGGSKRLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTY
FS

NT seq 909 nt +upstreamnt +downstreamnt
atgaaccaaaaaggcagagggcttgagatcctcatcaatgaaaaacaggacggccaatgg
ctgttttccgtactcaaaacagcgctcaaagcttctaaaccagtgatacaagactggatg
tcccatcaacagataaaggtcaatcacgaatccgtcttaaacaatatgattgtaaaaaag
ggagaccgcgtgttcattgatcttcaggaaagtgaagcatcttcggtcattccggagtat
ggcgagcttgatattttatatgaggacaatcatatgctcatcgtcaataaacccgctggc
atcgcaacgcatccgaatgaggatgggcaaaccggcacactggctaatttgatcgcttat
cattatcagataaatggcgaaacatgtaaggtgcgccacgtccatcgtcttgatcaggat
acatctggcgctatcgtttttgccaagcatcgtttggcacacgccatcttagaccagcag
ttagaaaaaaagacgctaaagcgtacgtataccgccatcgctgaaggtaagctacggacg
aaaaaagggacaattaattcaccaatcggcagagaccggtcacacccgacaagacgccgg
gtttcaccaggcgggcaaacagccgtcactcatttcaaggtaatggccagcaatgcgaaa
gaacggctgtcgctcgttgaattagagctggaaacaggcagaacacaccaaatccgtgtt
catctggcgagcctcggccatccgttgacaggagactcgctttacggaggcgggagcaag
cggctaaacaggcaggcactgcacgccaataaagtacaagcggttcacccgataacagac
gagctcatagttgctgaagcccctttccctgctgatatgaaaaacctttgccgcacatat
ttttcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system