KEGG   Bacillus subtilis subsp. spizizenii TU-B-10: GYO_2002
Entry
GYO_2002          CDS       T01635                                 
Name
(GenBank) RNA polymerase sigma-D factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
bst  Bacillus subtilis subsp. spizizenii TU-B-10
Pathway
bst02020  Two-component system
bst02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bst00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GYO_2002
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GYO_2002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bst03021]
    GYO_2002
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:bst02035]
    GYO_2002
Transcription machinery [BR:bst03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GYO_2002
Bacterial motility proteins [BR:bst02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    GYO_2002
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23 IF2_N UPF0175
Other DBs
NCBI-ProteinID: AEP86637
UniProt: G4NSQ7
Position
1820077..1820841
AA seq 254 aa
MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVSPAEIAEELGMTVQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAEKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKNLLEKVIQ
NT seq 765 nt   +upstreamnt  +downstreamnt
atgcaatccttgaattatgaagatcaggtgctttggacgcgctggaaagagtggaaagat
cctaaagccggtgacgatttaatgcgccgttacatgccgcttgttacatatcatgtaggc
agaatttctgtcggactgccgaaatcagtgcataaagacgatcttatgagccttggtatg
cttggtttatatgatgcccttgaaaaatttgaccccagccgggacttaaaatttgatacc
tacgcctcgtttagaattcgcggcgcaatcatagacgggcttcgtaaagaagattggctg
cccagaacctcacgtgaaaaaacaaagaaggttgaagcagcaattgaaaagcttgaacag
cggtatcttcggaacgtatcgcccgcagaaattgcagaggaactcggaatgacggtacag
gatgtcgtgtcaacaatgaatgaaggtttttttgcaaatctgctgtcaattgatgaaaag
ctccatgatcaagatgacggtgaaaacattcaggtcatgatcagagatgacaaaaatgtt
ccgcctgaagaaaagattatgaaggatgaactgattgcacagcttgctgaaaaaattcac
gaactctctgaaaaagaacagctggttgtcagtttgttctacaaagaggagttgacattg
acagaaatcggacaagtattaaatctttctacgtcccgcatatcacagattcattcaaag
gcactttttaaattaaagaatctgctggaaaaagtgattcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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