KEGG   Burkholderia stagnalis: WT74_10550
Entry
WT74_10550        CDS       T04885                                 
Symbol
ligA
Name
(GenBank) aromatic ring-opening dioxygenase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bstg  Burkholderia stagnalis
Pathway
bstg03030  DNA replication
bstg03410  Base excision repair
bstg03420  Nucleotide excision repair
bstg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bstg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WT74_10550 (ligA)
   03410 Base excision repair
    WT74_10550 (ligA)
   03420 Nucleotide excision repair
    WT74_10550 (ligA)
   03430 Mismatch repair
    WT74_10550 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bstg03032]
    WT74_10550 (ligA)
   03400 DNA repair and recombination proteins [BR:bstg03400]
    WT74_10550 (ligA)
Enzymes [BR:bstg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WT74_10550 (ligA)
DNA replication proteins [BR:bstg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WT74_10550 (ligA)
DNA repair and recombination proteins [BR:bstg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WT74_10550 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WT74_10550 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     WT74_10550 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WT74_10550 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH MctB 5_3_exonuc BRCT_2
Other DBs
NCBI-ProteinID: AOK53098
UniProt: A0A807EY60
Position
1:complement(2393878..2395953)
AA seq 691 aa
MARTQAEPPASQPDARAAWLRDQLERANYAYYVLDQPELPDAEYDRLFLELQQLEADHPE
LVTPESPTQRVGGEVASGFTPVVHAMPMLSLNNGFADEDIVAFDKRVADALDKDIDLAGT
VTDPVDYACELKFDGLAISLRYEHGVFVQAATRGDGTTGEDVTENVRTIRSIPLKLKGSH
MPAVLDVRGEVLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFF
AYGIGVLDGAAMPETHSALLDWYEQLGLPVNRERAVVRGAEGLLGFFHKVGEKRDALPYD
IDGVVYKVNRRDEQERLGFVSRAPRFALAHKFPAQEALTTLVAIDVQVGRTGAITPVARL
EPVFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGAILERRPEHAPEFV
MPTECPVCGSRIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLV
EQNLVRTPADLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGES
TAKDLAKHFGSLDPIMDASLEALLEVNDVGPVVAESLRQFFAEEHNRTVIEQLRAPGKVT
WAEGPPAPKAPQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGA
DAGSKLAKAEELGIPVLDEDGLHQLLEGHAP
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcccgaacccaagccgaaccgccagccagccagcccgacgcgcgcgccgcgtggctg
cgcgatcaactcgagcgggcgaactacgcctattacgtgctcgaccagccggaactgccc
gacgccgaatacgaccggctgttcctcgagctgcagcagctcgaagcggatcaccccgaa
ctcgtgacgcccgaatcgccgacgcagcgcgtcggcggcgaagtcgcgagcggcttcacg
ccggtcgtccatgcgatgccgatgctgtcgctcaacaacggtttcgccgacgaggacatc
gtcgcgttcgacaagcgcgtcgccgatgcgctcgacaaggacatcgacctcgccggcacc
gtgaccgacccggtcgattacgcgtgcgaactcaagttcgacggcctcgcgatttcgctg
cgctacgagcacggcgtgttcgtgcaggcggcgacgcgcggcgacggcacgaccggcgag
gacgtgacggaaaacgtccgcacgatccgctcgattccgttgaagctgaagggcagccat
atgcctgccgtgctcgacgtgcgcggcgaggtgctgatgttcaagcgcgatttcgcacgc
ctgaacgaacgccagcgcgccgcggagcagcgcgagttcgcgaatccgcgcaacgcggcg
gccggcagcctgcgccagctcgacccgaagatcaccgcgcagcgcccgctgtcgttcttc
gcatacgggatcggcgtgctcgacggcgcagcgatgcccgagacccacagcgcactgctc
gactggtacgaacagctcggcctgccggtgaaccgcgagcgcgcggtcgtgcgcggcgcg
gaagggctgctcggattcttccacaaggtcggcgagaagcgcgacgcgctgccgtacgac
atcgacggcgtcgtctacaaggtgaaccgccgcgacgaacaggagcggctcggcttcgtg
tcgcgcgcgccgcgcttcgcgctggcgcacaagttccccgcgcaggaggcgctcacgacg
ctcgtcgcgatcgacgtgcaggtcgggcgcaccggcgcgatcacgccggtcgcgcggctc
gagccggtgttcgtcggcggcgcgacggtgaccaacgcgacgctgcacaacgaagacgag
gtccgccgcaaggacatccgcatcggcgacaccgtgatcgtgcggcgcgcgggcgacgtg
atccccgaggtggtcggcgcgatcctcgagcggcggcccgaacacgcgcccgagttcgtg
atgccgaccgaatgcccggtgtgcggctcgcgcatcgaacggctgccggacgaggcgatc
gcgcgctgcacgggcggcctgttctgtccggcgcagcgcaagcaggcgctgtggcatttc
gcgcagcggcgcgcgctcgacatcgacggcctcggcgagaagatcatcgaccagctcgtc
gagcagaacctcgtgcgcacgccggccgacctgttcaacctcggcttcgcgacactcgcg
gaactcgaccggttcgccgagaagtccgcgcagaacctgctcgattcgctcgagaaggcc
aagcatacgacgctcgcgcgtttcatctacgcgctcggcatccgccatgtcggcgaatcg
accgcgaaggatctcgcgaagcacttcggctcgctggatccgatcatggatgcgtcgctc
gaggcgctgctcgaagtcaacgacgtcgggccggtggtcgccgaatcgctccgccagttc
tttgccgaagagcacaaccgcaccgtgatcgagcagctgcgtgcgcccggcaaggtcacg
tgggccgaagggccgcccgcgccgaaggcgccgcagggcgtgctcgccggcaagacggtc
gtgctgaccggcacgctgccgacgctcacgcgcgaggccgcgaaggaaatgctcgaggcg
gccggcgcgaaagtcgcgggctcggtctcgaagaagacggattacgtcgtcgcgggggcg
gacgcgggcagcaagctcgcgaaggccgaggaactcggcatccccgtgctggacgaagac
ggtttgcaccaactcctggagggccacgcgccatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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