KEGG   Burkholderia stagnalis: WT74_11055
Entry
WT74_11055        CDS       T04885                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bstg  Burkholderia stagnalis
Pathway
bstg03410  Base excision repair
bstg03430  Mismatch repair
bstg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bstg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    WT74_11055
   03430 Mismatch repair
    WT74_11055
   03440 Homologous recombination
    WT74_11055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bstg03400]
    WT74_11055
DNA repair and recombination proteins [BR:bstg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     WT74_11055
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     WT74_11055
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WT74_11055
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Glyco_transf_4 HTH_3
Other DBs
NCBI-ProteinID: AOK53185
UniProt: A0A119R853
Position
1:2501022..2502719
AA seq 565 aa
MTRIVTRSVAPADAEALARHGLHPVLARLYAARGVQSPTDIETALARLVPPTELKGCADA
AALLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRRRGAFPSKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARTASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDTMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
HQGVIGIVAGRLKEKFHRPSFTFAHADEQGTRVKGSGRSIPGFHLRDALDLVSKREPDLI
VAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASAL
IAYRLVADTWNGVTRVQLIVEHAAA
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacccgcatcgttacccgttccgtcgcgcccgccgacgccgaggcgcttgcccgccac
ggcctgcacccggtgctcgcgcgcctgtatgccgcgcgcggcgtgcaatccccgaccgac
atcgagactgcgctcgcgcggctcgtcccgcccaccgagctgaagggctgcgccgacgcg
gccgcgctgctcgccgacgcgatcgccgacaagcggcgcctgctcgtcgtcgccgactac
gactgcgacggcgcgaccgcctgcgcggtcgcggtgcgcgggctgcggatgttcggcgcg
cagatcgactacctggtgccgaaccgcttcgagtacggctatggcctcacgcccgagatc
gtcgagctggcggccgcgcgcaagcccgacctgctgatcaccgtcgacaacggcatcgcc
agcgtcgcgggcgtcgaagccgcgaacgcgcgcggcatcgacgtgctcgtgaccgaccac
cacctgcccggcgacgcgctgccggccgcgcgcgcgatcgtcaacccgaaccagccgggc
tgcgcgttcccgagcaagcacatcgccggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgccgccgcggcgcgttcccgagcaaggaagccgagccgcgcctc
gacggcctgctcgacctcgtcgcgctcggcaccgtcgccgacgtcgtgcggctcgacggc
aacaaccgcgtgctggtcgcgcaggggctgcagcggatccgcaacggccggatgcagccg
ggcatcgccgcgctgttccgcgcggctgcccgcgacgcgcgcaccgcgtcgggcttcgat
ctcggcttcggcctcgggccgcggctgaacgcggccggccggctgtcggacatgtcgctc
ggcatcgagtgcctgaccaccgacgacgtcggccgcgcgtgggagctcgcgcagcagctc
gacacgatgaaccgcgagcgccgcgaaatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgccgacgtcgatccggccgacgcgtgcacgatcaccctgttcaaccccgaatgg
caccagggcgtgatcggcatcgtcgccgggcgcctgaaggagaaattccaccgcccgtcg
ttcacgttcgcgcacgcggacgagcaaggcacgcgggtcaagggctccggccggtcgatc
cccggtttccacctgcgcgacgcgctcgacctcgtgtcgaagcgcgagccggacctgatc
gtcgcgttcggcggccatgcgatggcggccggcctgacgctcgacaccgagaacgtgccg
cgcttcgcggccgcgttcgaggccgtcgcgcgcgaatggctgtccgacgacgcgctcgcc
cgcgtgatcgagaccgacggcgagctcgaggatgcgtacttcacgccgcagttcgtcggg
ctgctcgacgaggccgtctggggccagggctttccggccccgcttttctccggcgaattc
gacgtcgtgtcacagagcctcgtgaaggaaaagcacctgaagctgcagctcgcgcgcggc
cgccagcgcttcaacgcgatctggttcaaccacaccgagccgctgccggcgagcgcgctc
atcgcgtaccgcctcgttgccgacacgtggaacggcgtcacgcgcgtgcaattgatcgtc
gagcacgcagcggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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