KEGG   Bacillus subtilis subsp. subtilis 168: BSU16580Help
Entry
BSU16580          CDS       T00010                                 

Gene name
polC
Definition
(RefSeq) DNA polymerase III PolC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Module
bsu_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU16580 (polC)
   03430 Mismatch repair
    BSU16580 (polC)
   03440 Homologous recombination
    BSU16580 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU16580 (polC)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU16580 (polC)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU16580 (polC)
DNA replication proteins [BR:bsu03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU16580 (polC)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU16580 (polC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_alpha PHP RNase_T DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI HHH_6 DUF5051 HHH_3 tRNA_anti-codon RNase_H_2 Zn-ribbon_8 DZR
Motif
Other DBs
NCBI-GeneID: 939620
NCBI-ProteinID: NP_389540
Pasteur: BG10263
BSORF: BG10263
UniProt: P13267
Position
1727133..1731446
Genome map
AA seq 1437 aa AA seqDB search
MEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKASKSWHFHFQFKSLLPFQI
YDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAEYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATIIELTGITDDML
QDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLEVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLELELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDNNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMED
INAKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq 4314 nt NT seq  +upstreamnt  +downstreamnt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaacatggcgagattaaaaagctgacaattcac
aaagcttctaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacacattaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatct
tcaattgaagttcaggatgccgaggtcagtgaaagtatcgttcaagactactggtcacgc
tgcattgaagaactgcagggcatttcgccgccgattatcagtcttttaaaccagcaaaaa
ccgaagctgaagggcaataaactgattgtcaaaaccaaaacagatacagaagcggctgcg
ctaaagaacaaatacagttccatgattcaagcagaataccgtcaatttggctttccggat
cttcagcttgatgctgaaatatttgtatccgagcaagaagttcaaaagtttcgggagcaa
aagcttgcggaagaccaagagcgggctatgcaggccttgattgaaatggagaagaaagat
aaagaaagtgatgaagaccaagcaccatctggtcctcttgttatcggttatcaaattaaa
gataacgaggaaatccgaacacttgacagcatcatggacgaagaacggagaattacggtc
caaggttatgtgtttgatgtggagacgcgcgagctgaagagcgggcgcacgctgtgtatc
ttcaaaattacagactatacaaatagtattttgatcaaaatgtttgcacgtgaaaaagaa
gatgcggcgctgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcatt
caaaatgatacatttgtcagagaccttgtcatgatcgcaaatgacgtaaacgaaataaaa
gcaaaaacccgtgaagattcagcacctgaaggagaaaaaagagtggaattgcatcttcat
tccccaatgagccaaatggatgctgttacgggtatcggaaagcttgtcgaacaggcgaaa
aaatgggggcatgaggccatcgctttgaccgaccatgctgtcgttcaatccttccctgat
gcgtattctgcggccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctc
gtggatgatggcgtgccaattgcttataatgccgcacatcgtctgctcgaagaagaaaca
tatgttgtttttgacgttgagacgacaggattgtctgctgtatacgataccattattgag
ctggctgcagtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaac
ccgcatcgtccgctttccgccacaatcatagagctgacagggatcacagatgatatgcta
caagacgctccggatgtcgtagatgtaataagagatttcagagaatggattggcgatgat
attcttgtcgctcataatgcaagctttgatatgggattcttaaatgtagcctataaaaaa
cttcttgaagtcgaaaaagctaaaaacccagtcattgatacgcttgaacttggacgtttt
ctctatccggaatttaagaaccaccggttgaacacactttgtaaaaagtttgatatcgag
ctcacacagcatcaccgtgcgatctatgatactgaggcaaccgcttatttgcttctgaaa
atgctgaaagacgcagctgaaaaaggtattcagtaccatgatgagttgaatgaaaatatg
ggtcagtccaatgcttatcaaagatcaagaccgtatcatgcaacattacttgccgtgaac
agcacgggacttaaaaatttatttaagcttgtgtcactttctcatattcattatttttac
agagtgccgcgtattccgagatctcagcttgagaaatacagggaagggcttctgatcggt
tctgcttgtgacaggggagaggtttttgagggaatgatgcaaaaatcgcctgaagaggtg
gaagatatcgcgtcattctatgattaccttgaggttcagccgcctgaagtgtatcgtcac
ttgctggagcttgaactggtccgtgatgaaaaagcgctgaaagaaattattgcgaatatc
acgaagctgggggaaaagcttaataaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatctacagaaagattttaatatcctcacaaggcggggcaaatccg
ctgaataggcatgaactgccgaaagtgcatttcagaacgacagacgaaatgcttgaagct
ttttctttcttaggtgaagaaaaagcgaaggagatcgtagtcaccaatacccaaaaggtt
gcttctttagttgatgacatcaagccgattaaagatgatttatatacgccgaaaatcgaa
ggcgctgatgaagagatcagagaaatgagctatcagcgtgcaagaagcatttacggggaa
gagctgcctgaaattgtcgaagcgcggattgaaaaagagttaaagagtattattggccac
ggatttgctgttatttacttgatctctcacaaacttgtaaaacgttcactagatgacggg
tatctcgttggttcccgtggttccgtaggatcttcattagttgcgacacttactgagatt
actgaggtaaacccgctgccgccgcactatgtttgtcctgagtgccagcattctgagttc
tttaatgacggttctgtcggttctggttttgacctgcctgacaagacatgccctcattgc
ggaacgcctttgaaaaaagacggccatgatattccatttgaaacgttcttaggatttaaa
ggggacaaagtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacac
aattacacaaaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcacg
gtggcagaaaaaacagcctacggttatgtaaaaggctatgccggagacaacaatcttcat
atgcgcggtgccgaaatagatcggctcgtacagggatgcacaggtgtaaaacgtacaact
ggacagcaccctggcggtattatcgtagttccggattatatggatatttatgatttttca
ccgatccagttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttc
cactccatccatgacaacctgttaaaacttgatattctcggacacgatgacccgactgtt
attcggatgcttcaagacttaagcggaatagatccgaaaacaattccgacggatgatcct
gaagtgatgaagatcttccagggaaccgaatcactcggtgtgactgaagaacagattggc
tgtaaaacgggcactcttggaattcctgaattcggaacccgatttgtccggcagatgctt
gaagatacaaagccgaccactttttctgagctcgttcagatttcaggcttgtctcacgga
actgatgtatggcttggcaatgcacaggagctcatccacaataatatttgtgagctgagt
gaggttatcggctgccgtgatgacattatggtttatttaatctatcaaggccttgagccg
tcccttgcctttaaaatcatggaattcgtgcgtaaaggaaaaggattaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatattgattcctgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcatatgtcttaatggcagtccgcattgct
tactttaaagtgcatcatgctcttttgtattatgcggcttattttaccgttcgtgcagat
gactttgatattgatacaatgatcaagggctctacagcaatcagagcggtaatggaggat
ataaacgctaaaggacttgatgcttcaccgaaggaaaagaaccttctgactgttttagaa
ttagcgcttgagatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctcc
agcgccacagagtttattattgacggcaacagtcttattccgccgtttaactctattcca
gggttagggacgaacgctgctttgaacattgtaaaagctcgcgaagaaggcgaattcctc
tcaaaagaagatttgcaaaagagagggaaagtatcaaaaacgattttagagtacttagat
cgccatggctgtctggagtcactgcctgatcaaaaccaattgtcactgttctaa

KEGG   Bacillus subtilis subsp. subtilis 168: BSU20340Help
Entry
BSU20340          CDS       T00010                                 

Gene name
yorL
Definition
(RefSeq) DNA polymerase YorL
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Module
bsu_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU20340 (yorL)
   03430 Mismatch repair
    BSU20340 (yorL)
   03440 Homologous recombination
    BSU20340 (yorL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU20340 (yorL)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU20340 (yorL)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU20340 (yorL)
DNA replication proteins [BR:bsu03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Motif
Other DBs
NCBI-GeneID: 939437
NCBI-ProteinID: NP_389916
Pasteur: BG13696
BSORF: BG13696
UniProt: O31902
Position
complement(2175596..2179513)
Genome map
AA seq 1305 aa AA seqDB search
MIGCHCHTDRSNIRLLDSTNSVKELLKTAVKMEYKGLAITDHEVLSAHLDAIRTVREMKK
KGDMPEDFKLILGNEAYLVDSLEEVRDNYKSGVTKFPHFLMLAMDPKGHEQLRILSSQAW
ENSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNIHLLKIKAFEETGDSQSI
KQHKLKIHEFITWCIEVFGKDKFFIELQPALSEEQIYCNKKLIDIANGYDLQMIVTTDAH
YLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYIDKEVIDQAIKNTMLI
GEMIEDYTIEHEPIIPKMELPNFKLRHLFKPAYDQYEYIKKMSESADEQDRYLLKLIEDG
FEEKLKTSELTREAFHKILNRINVELGELWEISQKLNQSMSSYYITVREIINIIWDDECG
GDSLVGAARGSAAGYLVNYLLDNTQINPMQYDLPHWRHIHKSRPDLPDIDIDTEGSKRQK
ILKALRERFGDKRVLQIATFGTEGSKSALQTACRGLGIDNDISQYLSGMIPFERGSNWPL
KHCFYGDKETGRKPIKEFIREVEQYPNLKETALKIEGLTNKRSSHAAGVIIFNDEYTKSN
AMMKTPKGAYITQFNMGDSEAMGSVKFDLLTIEALDKIRVTLDQLIENNEIEWQGSLKET
YNKYIHPDVIEYEDDKLWEMAGNGEIMDLFQFSTEVGHQSVVKVKPKNLLEAAVTNSLMR
LMSDGEEQPVDTYVKYKNNLNKWYEEMTRYGLSEKEIRVMERHLKDIYGVADTQEVVMQM
VMDKDIANFDIKESNYLRKSIAKKKEDVLKEVEELFFKKGKEIGTSDNLLNYVWNVQFKR
QFGYSFSLLHTLAYSIIALQELNLNYRYNPLYWNTACLTVNSGGIDTEDTKDNKKTAATN
YGKVASAIGNIRQRGIKIDLPDINKADFGFRTDINNNSILFGLKGMNGIGDDVIHHIVLN
RPYSDFNDFIERMFKSGIIKKGQVIQLIKGGCFDSFGNRQEIMKAFISLISEPKSKLTLS
NLKMLIENNIVPSEFAQEVRFFRFKDYISKKVYKTLKSPKDKLFLLDDVSASFYNQHFSE
DSVVDMLNGQLVISEKAFKKEYDNKMSNIKSWITTEEPLKKLNDCLLIKEWEKYADGSLG
KWEMDSLSYYYNDHELSGVNFAKYDIADFYKLPAEPVKGKPYQWRGKTLYEYETTRIIGT
VLDRDKNKHAITLLTPTGVVTVKQWSGSFSHYNKQISRSIGGGKKEVIEKSWYTRGTLLM
FTGFRRGNNFIPKVYKDSIYNHTVCRIDFVDNEGSMSLTTKRAEI
NT seq 3918 nt NT seq  +upstreamnt  +downstreamnt
ttgataggatgtcactgtcacacagataggagtaacataaggcttctagactcaacaaac
tcagttaaagaactgctcaaaactgcagtaaagatggaatataagggattggccataaca
gaccatgaagtcctctcagcacatttagatgctattcgaacagttagagaaatgaaaaag
aagggggatatgccagaagattttaaactgatattgggcaatgaagcgtacctagtcgat
tctttagaggaagttcgagataactataaatcgggagtgacaaaatttccgcatttcttg
atgttggcaatggatccaaaaggacatgagcagttaagaatactgtcttctcaagcctgg
gaaaactcattttatacaggaacaatggaaagagtgccgacagtaaaaaaggatgtagag
gagctattaagtaaagatccaggccacatcattgctaccacagcttgcttggggtctgag
gtaaacattcacctgttaaagataaaggcttttgaagaaactggtgattctcagtcaatt
aagcagcacaaactaaagattcatgagtttataacttggtgtatagaggtttttgggaag
gataagttttttatcgagcttcaacctgcactgagtgaagaacagatttactgtaacaag
aagctgatagatatagccaacgggtatgacttgcaaatgattgttacaacagatgctcac
tatctaagaccagaagatagagcaattcatcaagcctttttaaacgctaaggatggagaa
agagaagttgattccttttatgaagcctgtttcgttcaaaacgttgatgaaattcacgag
agaatggactacattgataaagaagtcatcgatcaggccataaaaaatacaatgctcatt
ggtgagatgattgaagactatactatagagcacgaaccaattatccctaagatggagctt
cctaactttaaattaagacatttatttaaaccagcatatgatcaatatgaatatataaaa
aagatgtctgaatcagcagatgaacaagatagatatctccttaagttaattgaggacgga
tttgaagagaaattaaaaacaagcgaactaacgagagaagcttttcataaaatattgaac
aggattaacgttgaactgggtgaactttgggaaatcagccaaaagctgaatcagtctatg
tcttcttattacataacagttagagaaatcattaatattatttgggatgatgagtgtgga
ggagatagtttagttggggcagccaggggaagtgctgcaggttacttagttaattatcta
ctcgacaatactcaaattaatccaatgcaatatgatttaccacattggagacatatacat
aaatcgagacctgacctaccagatatcgatattgatactgaaggatcaaaaagacaaaaa
attcttaaggcactaagagaaaggtttggagacaagcgtgttcttcaaattgctactttt
ggaactgagggttcaaaatcagcgcttcagacagcatgtagaggcttaggaatcgataat
gatatatcccagtatttaagtggaatgattccatttgaaagaggatctaactggcctttg
aagcattgtttttatggtgacaaagaaactggcaggaagccaattaaagagtttattagg
gaggttgaacaataccctaatcttaaagaaacagctttaaaaattgaagggttaactaat
aagcgctcttctcatgcagccggagtaattatctttaacgatgaatatacaaagtcgaat
gcaatgatgaaaactcctaaaggagcttatattacacagtttaatatgggtgacagtgaa
gccatgggctcagtaaagtttgaccttcttacaattgaagctttagataagattagagta
acattagaccaattaatcgagaataatgaaattgaatggcaaggaagcttgaaggaaaca
tacaacaaatacatccatccagacgtaattgagtatgaagatgataagctatgggaaatg
gctggtaatggggaaatcatggatttattccagttctcaactgaagtcggtcatcaatca
gttgtcaaagtaaaacctaagaacttacttgaagcagcagtaaccaattctttaatgagg
cttatgtcagacggtgaagaacagcctgtagatacatatgttaaatacaaaaataacctt
aataaatggtatgaagaaatgacacggtacggtctaagcgaaaaggaaatcagagtaatg
gagaggcaccttaaggacatttatggtgttgctgatactcaagaagtggttatgcagatg
gttatggataaagatatagctaactttgacattaaagaatcaaattatcttaggaaatcc
atagcaaaaaagaaagaagatgtactaaaagaagtggaagaattgttttttaaaaaagga
aaggagattggcacttctgataacctgttgaattatgtctggaatgttcaatttaaaaga
cagtttggctacagttttagtttacttcataccttggcatattcaattattgcattacag
gaattgaacttaaactatcgatataatcctttatactggaatactgcttgtttaacggta
aacagcggaggaatagataccgaggatacaaaagacaacaaaaagacagctgctacaaac
tacggaaaagttgcttcagccatcggaaacattagacaaagagggattaaaatagacctc
ccagatataaataaggctgattttggttttaggactgatattaacaacaattcaatttta
tttggacttaaaggaatgaatggaattggagacgatgttattcatcatatagttctaaat
agaccatatagtgactttaacgactttattgaaagaatgtttaagagcggcattattaag
aaaggacaagtaatccaattaataaaaggaggctgctttgattcttttggaaacaggcaa
gaaatcatgaaggcctttattagcttaatatcagaaccaaaaagtaagcttacgttgtct
aatttaaaaatgctaattgaaaacaacattgttccttcagaatttgcacaagaagtgaga
ttctttcgttttaaagattacatcagcaaaaaggtgtacaaaacattaaagtcgccaaaa
gataaactttttttattggacgatgtatcagcttcgttttataaccagcatttcagtgag
gatagtgtagttgacatgttaaacgggcagcttgtcatttctgaaaaagcttttaaaaaa
gaatatgataacaagatgtctaatataaagtcctggataacaacagaagaaccactgaag
aaattgaatgattgtttattaataaaagagtgggaaaaatacgccgatgggtcattagga
aagtgggaaatggattcattgagctattattataatgaccatgagctttctggtgtaaac
tttgccaagtatgatattgctgacttttataaactgccagcagagccggtcaaaggtaaa
ccttatcaatggagagggaaaactctctatgaatatgagactacacggattataggcact
gttttagatagggataaaaacaaacatgcaattactcttctaacacctacaggggtggtt
acagttaaacagtggtcgggcagctttagtcattacaataaacagatttctagatcaatt
ggtggcggaaagaaagaggtaatcgagaaatcttggtataccagaggaacattgctcatg
tttactggtttcagaagaggtaacaattttattccgaaggtctataaagatagcatatat
aatcacacagtctgcagaatagattttgttgataatgaaggaagtatgagtttgacaact
aaaagggcagaaatataa

KEGG   Bacillus subtilis subsp. subtilis 168: BSU29230Help
Entry
BSU29230          CDS       T00010                                 

Gene name
dnaE
Definition
(RefSeq) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Module
bsu_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU29230 (dnaE)
   03430 Mismatch repair
    BSU29230 (dnaE)
   03440 Homologous recombination
    BSU29230 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU29230 (dnaE)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU29230 (dnaE)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU29230 (dnaE)
DNA replication proteins [BR:bsu03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU29230 (dnaE)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU29230 (dnaE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF4539 tRNA_anti_2 DUF4183
Motif
Other DBs
NCBI-GeneID: 936593
NCBI-ProteinID: NP_390801
Pasteur: BG12583
BSORF: BG12583
UniProt: O34623
Position
complement(2991269..2994616)
Genome map
AA seq 1115 aa AA seqDB search
MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIAITPGEKGYIETLLEGGLFEQAAQASLEFQSIFGKGAFYFSYQPFKGNQVLSEQILKL
SEETGIPVTATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMEGLRSRFGKPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERVSMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDEARQQSPQLDKRLRESSLLQQVYSIAR
KIEGLPRHASTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRI
LPPSVNKSSFPFTVENGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKMLEALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLTAQGAVSILQAQRAVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDK
IQFIMSRAELLEDMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHINADHQVLYRLKELLGQKNVVLKQW
NT seq 3348 nt NT seq  +upstreamnt  +downstreamnt
atgtcttttgttcacctgcaagtgcatagcgggtatagcctgctaaacagcgccgcggct
gtggaagaactcgtcagtgaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcttgcaaggcgagagggatcaac
ccaataatcggtttgacggcttctgtttttacagatgacagcgagcttgaagcatacccg
ctcgtcctgctggcaaaatcgaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatctaaatcaaaaggcggactgaagccgaaatggcttcacagttatcgagaaggg
attatcgcaataacgcccggcgaaaaaggatatattgaaacgcttcttgaaggagggctg
ttcgaacaggctgctcaagcctcgctggaatttcagtctatattcggaaagggagctttt
tatttctcctatcagccttttaaagggaatcaagtcttgtctgagcagattctaaagctg
tcagaagaaacgggtatccctgttacggccacaggcgatgtgcattacataaggaaggaa
gataaggctgcctaccgttgtttgaaagcgattaaagcgggggaaaaactgacggatgca
cccgctgaagatttgcctgatctcgatttgaaaccactcgaagaaatgcaaaacatttat
cgagagcatcccgaggcactgcaagcttctgtagagatcgcggaacaatgccgggttgac
gtcagtctcgggcagacccgtctaccgtcttttccgaccccagacggaacgtccgctgat
gattatttaacggatatctgtatggagggactccgcagccgtttcggcaagcctgatgaa
cgataccttcgccgtcttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtgtgggattttatgaagcacgcccatgaaaaagggattgttacagga
ccgggaaggggttctgcggcgggttctcttgtggcatatgtgctgtatatcacagatgtt
gacccgattaagcatcaccttctgtttgaaagatttttaaatcccgaacgcgtcagcatg
ccggatattgatattgactttcccgatactagaagggatgaagtcattcaatatgttcag
cagaaatacggtgcaatgcacgtcgcacagattatcacctttggaacacttgcggcaaag
gcggcgctccgggacgtcggcagagtattcggcgtcagcccgaaggaggcagatcagctt
gcaaaactcattccttcaagaccgggaatgacgctggatgaagcgagacagcagtcaccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctattcaattgcccgg
aaaatagaagggctgccaaggcatgcatcaacccacgcagcgggcgttgtcctgagtgaa
gaaccgttaacagatgttgttccgcttcaagaagggcatgaagggatctatttaacgcaa
tacgcgatggaccatcttgaagacttgggccttttaaaaatggatttcttaggtttgagg
aatctgacacttattgaatccatcacttcaatgattgaaaaagaagaaaatattaaaata
gacctttcaagtatttcctacagcgatgacaaaacgttctccttgctgtcaaaaggggat
acgacaggcattttccagcttgaatctgcagggatgagaagcgtcttgaaacggctgaaa
ccttcgggcctagaagatattgtggcggtcaatgcactgtaccggccgggtccgatggaa
aatattccgttatttatcgaccgtaaacacggtcgggcgcctgttcactatcctcatgaa
gatttaaggagcattttggaagatacatatggcgtcattgtgtatcaggaacaaattatg
atgattgcttcccgtatggcggggttttctttaggcgaagcggacctattgagaagggcg
gtcagcaaaaagaaaaaagaaatcctggacagagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaggtctacgatttaatcgtcaaattc
gcaaactatggctttaacagaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatctctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaataaaagcagttttccgtttacagttgaaaacggatctgtcaga
tacagcctccgcgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaaatgcttgaagcacttatcttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgttttcaattaagccgaagtat
gtggagacggaggagcttcctctggtggatttacttgcgtttgaaaaggaaacgcttggc
atttatttttcaaatcatcccctctccgccttccgaaaacagctcactgcgcaaggagca
gtctccattctgcaggctcagcgggcagtcaaaaggcagctttcactaggcgttctgctg
tcgaagatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gatgaaaccggcgagatggaagccgtagtcttccctgaacaattcagacagctttctccc
gttttaagagaaggcgctcttttgttcactgcggggaaatgtgaagttagacaagataag
atccaattcatcatgtcccgggcagaattattagaagatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcacagccaggagatcctggcaaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcaaaaa
cagacgattaagctacctgagtcgttccatatcaatgcagatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa

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